augustus_masked_scaffold24039_abinit_gene_0_10_mRNA_1 (PRGDB2174810)

Gene information

PRGdb IDGene nameClassGene typeDomain typesSpecies
PRGDB2174810augustus_masked_scaffold24039_abinit_gene_0_10_mRNA_1TputativeTIRSolanum commersonii

Protein domain view

Blast search results

Gene name hitSpecies hitIdentity (%)Length (bp)E-value
PGSC0003DMT400075451Solanum tuberosum93.3 2246e-145
PGSC0003DMT400075441Solanum tuberosum85.3 2252e-131
Solyc12g096900.1.1Solanum lycopersicum83.5 2241e-127
augustus_masked_scaffold24039_abinit_gene_0_11_mRNA_1Solanum commersonii80.6 2273e-120
PGSC0003DMT400075444Solanum tuberosum79.1 2256e-120
PGSC0003DMT400075447Solanum tuberosum78 2277e-117
Solyc12g096880.1.1Solanum lycopersicum70.2 942e-30
Solyc12g097020.1.1Solanum lycopersicum63.8 694e-22
ONIVA03G07140.3Oryza nivara37.5 1361e-21
ONIVA03G07140.1Oryza nivara37.5 1362e-21
ORGLA12G0110800.1Oryza glaberrima37.5 1362e-21
ONIVA03G07140.2Oryza nivara37.5 1362e-21
LOC_Os12g30180.1Oryza sativa37.5 1362e-21
Solyc12g097000.1.1Solanum lycopersicum62.3 693e-21
KN540147.1_FGP002Oryza longistaminata36 1365e-20
MDP0000252442Malus domestica40.3 1444e-19
PGSC0003DMT400008870Solanum tuberosum58.3 602e-17
PGSC0003DMT400075625Solanum tuberosum45.9 983e-17
OGLUM09G00300.1Oryza glumaepatula34.1 1297e-17
BGIOSGA037403-PAOryza sativa Indica Group38 1132e-16
Solyc07g052770.2.1Solanum lycopersicum56.5 692e-15
Solyc07g052780.2.1Solanum lycopersicum65.2 461e-13
PGSC0003DMT400083472Solanum tuberosum43.7 714e-13
PGSC0003DMT400083473Solanum tuberosum43.7 715e-13
Solyc09g007710.2.1Solanum lycopersicum54.1 613e-12
Bostr.29514s0004.1.pBabiana stricta30.3 1857e-12
Solyc01g014840.2.1Solanum lycopersicum45.5 777e-12
Ciclev10018572mCitrus clementina37.7 692e-11
Ciclev10024485mCitrus clementina39.1 694e-11
AT1G65390.1Arabidopsis thaliana38.6 1014e-11
OGLUM12G13960.1Oryza glumaepatula38 1005e-11
Cagra.8115s0001.1.pConradina grandiflora45 805e-11
475633Arabidopsis lyrata41.4 875e-11
MDP0000490004Malus domestica40.3 729e-11
Potri.003G198900.1Populus trichocarpa40.3 671e-10
PGSC0003DMT400061830Solanum tuberosum42.9 771e-10
orange1.1g001889mCitrus sinensis37.7 693e-10
PGSC0003DMT400061831Solanum tuberosum42.9 773e-10
OMERI02G17150.4Oryza meridionalis38.1 973e-10
NNicotiana glutinosa43.8 643e-10
RY-1Solanum tuberosum subsp andigena41.8 674e-10
OMERI02G17150.2Oryza meridionalis38.1 975e-10
OMERI02G17150.1Oryza meridionalis38.1 975e-10
Sobic.005G118800.2.pSorghum bicolor29 1457e-10
Sobic.005G118800.3.pSorghum bicolor29 1457e-10
Sobic.005G118800.4.pSorghum bicolor29 1457e-10
Sobic.005G118800.1.pSorghum bicolor29 1457e-10
MDP0000136726Malus domestica29.9 1077e-10
Ciclev10024129mCitrus clementina37.1 707e-10
PGSC0003DMT400056338Solanum tuberosum44.4 631e-9
PGSC0003DMT400056337Solanum tuberosum44.4 631e-9
MDP0000481973Malus domestica32 1001e-9
Ciclev10023772mCitrus clementina41.5 651e-9
PGSC0003DMT400006232Solanum tuberosum43.8 642e-9
PGSC0003DMT400006231Solanum tuberosum43.8 642e-9
Prupe.8G023100.1.pPrunus persica42.1 572e-9
Ciclev10023529mCitrus clementina34.4 642e-9
Prupe.8G023900.1.pPrunus persica43.9 573e-9
Gorai.007G318500.1Gossypium raimondii36.9 653e-9
Ciclev10024285mCitrus clementina34.1 823e-9
PGSC0003DMT400043733Solanum tuberosum42.2 644e-9
Ciclev10018624mCitrus clementina34.4 644e-9
SapurV1A.1341s0080.1.pSalix purpurea40 704e-9
Ciclev10023982mCitrus clementina32.1 814e-9
orange1.1g041079mCitrus sinensis35.9 645e-9
Ciclev10018526mCitrus clementina34.4 645e-9
Ciclev10018520mCitrus clementina34.4 645e-9
SapurV1A.1050s0050.1.pSalix purpurea40 705e-9
Ciclev10018418mCitrus clementina39.4 715e-9
Ciclev10023592mCitrus clementina35.9 646e-9
Ciclev10018772mCitrus clementina39.4 716e-9
Medtr3g058790.1Medicago truncatula32.8 676e-9
Gorai.007G318900.1Gossypium raimondii36.9 657e-9
Ciclev10024308mCitrus clementina34.4 647e-9
mrna24999.1-v1.0-hybridFragaria vesca41.5 657e-9
MDP0000840525Malus domestica39.4 667e-9
Ciclev10018611mCitrus clementina30.9 818e-9
Glyma.02G077000.1.pGlycine max41.7 608e-9
MDP0000634037Malus domestica32.5 809e-9
SapurV1A.1299s0010.2.pSalix purpurea40 709e-9
SapurV1A.1299s0010.1.pSalix purpurea40 709e-9
OPUNC12G11010.3Oryza punctata35 1009e-9
Bostr.18351s0045.1.pBabiana stricta27.6 1851e-8
SapurV1A.1299s0010.3.pSalix purpurea40 701e-8
MDP0000297052Malus domestica32.6 981e-8
PGSC0003DMT400043719Solanum tuberosum38.8 671e-8
Ciclev10023975mCitrus clementina32.1 811e-8
Ciclev10024141mCitrus clementina39.1 641e-8
Ciclev10023827mCitrus clementina35.4 792e-8
orange1.1g036738mCitrus sinensis34.8 692e-8
Ciclev10023599mCitrus clementina37.3 752e-8
Medtr6g087260.1Medicago truncatula39.7 682e-8
orange1.1g008685mCitrus sinensis38.5 652e-8
Potri.T005100.1Populus trichocarpa37.1 702e-8
MDP0000311732Malus domestica36.4 1102e-8
Ciclev10024456mCitrus clementina34.4 642e-8
Potri.T005200.1Populus trichocarpa38 712e-8
orange1.1g009845mCitrus sinensis32.1 813e-8
Potri.012G135700.1Populus trichocarpa37.3 673e-8
Phvul.003G269200.1Phaseolus vulgaris34.6 813e-8
Medtr4g036080.1Medicago truncatula35.8 673e-8
Potri.003G200100.2Populus trichocarpa40 603e-8
Sevir.8G130800.7.pSetaria viridis29.7 1453e-8
Seita.8G123800.5.pSetaria italica29.7 1453e-8
MDP0000502392Malus domestica31.9 723e-8
Sevir.8G130800.8.pSetaria viridis29.7 1453e-8
Sevir.8G130800.5.pSetaria viridis29.7 1453e-8
Sevir.8G130800.4.pSetaria viridis29.7 1453e-8
Seita.8G123800.3.pSetaria italica29.7 1453e-8
Potri.003G084200.1Populus trichocarpa36.2 693e-8
MDP0000129088Malus domestica33.9 653e-8
Solyc00g294230.1.1Solanum lycopersicum61 413e-8
Sevir.8G130800.9.pSetaria viridis29.7 1454e-8
Sevir.8G130800.6.pSetaria viridis29.7 1454e-8
Sevir.8G130800.3.pSetaria viridis29.7 1454e-8
Seita.8G123800.4.pSetaria italica29.7 1454e-8
Ciclev10018550mCitrus clementina36.2 694e-8
PGSC0003DMT400006229Solanum tuberosum38.1 634e-8
Sevir.8G130800.2.pSetaria viridis29.7 1454e-8
Seita.8G123800.2.pSetaria italica29.7 1454e-8
Ciclev10024233mCitrus clementina32.4 744e-8
Sevir.8G130800.1.pSetaria viridis29.7 1454e-8
Seita.8G123800.1.pSetaria italica29.7 1454e-8
SapurV1A.1791s0010.2.pSalix purpurea34.3 704e-8
orange1.1g046314mCitrus sinensis32.4 744e-8
SapurV1A.1791s0010.4.pSalix purpurea34.3 705e-8
SapurV1A.1791s0010.5.pSalix purpurea34.3 705e-8
SapurV1A.1791s0010.6.pSalix purpurea34.3 705e-8
Medtr3g058780.1Medicago truncatula35.8 675e-8
SapurV1A.1791s0010.3.pSalix purpurea34.3 705e-8
SapurV1A.1791s0010.1.pSalix purpurea34.3 705e-8
SapurV1A.1791s0010.7.pSalix purpurea34.3 705e-8
Glyma.12G132200.1.pGlycine max36.7 905e-8
GRMZM2G051502_P01Zea mays30.3 1425e-8
Ciclev10023272mCitrus clementina32.9 856e-8
mrna34408.1-v1.0-hybridFragaria vesca35.1 746e-8
MDP0000378930Malus domestica33.9 656e-8
Ciclev10023505mCitrus clementina46.8 476e-8
Glyma.12G240100.1.pGlycine max43.3 606e-8
Ciclev10023283mCitrus clementina39.1 647e-8
Potri.T005500.1Populus trichocarpa38.6 707e-8
PGSC0003DMT400075624Solanum tuberosum54.4 467e-8
Ciclev10018627mCitrus clementina39.1 647e-8
PGSC0003DMT400043732Solanum tuberosum35.8 677e-8
Solyc01g008800.1.1Solanum lycopersicum34.3 678e-8
VIT_13s0147g00120.t01Vitis vinifera38.2 688e-8
Ciclev10024604mCitrus clementina39.1 649e-8
mrna34976.1-v1.0-hybridFragaria vesca34.2 799e-8
Ciclev10023609mCitrus clementina35.4 659e-8
Medtr3g058720.1Medicago truncatula35.8 679e-8
Medtr3g079790.1Medicago truncatula31.3 671e-7
Gorai.007G321800.1Gossypium raimondii39.7 731e-7
MDP0000664885Malus domestica32.6 981e-7
Medtr8g028800.1Medicago truncatula36.5 741e-7
Ciclev10024599mCitrus clementina31.2 641e-7
Ciclev10024092mCitrus clementina35.9 641e-7
Bs4Solanum lycopersicum42.6 611e-7
Solyc05g007850.1.1Solanum lycopersicum42.6 611e-7
MDP0000399716Malus domestica32.9 731e-7
Ciclev10018537mCitrus clementina30.9 811e-7
Medtr2g039770.1Medicago truncatula38.4 731e-7
mrna21370.1-v1.0-hybridFragaria vesca40 701e-7
orange1.1g047103mCitrus sinensis31.2 641e-7
Prupe.1G523900.1.pPrunus persica41.9 741e-7
Ciclev10024176mCitrus clementina31.2 641e-7
Medtr3g058670.1Medicago truncatula31.3 671e-7
Ciclev10024297mCitrus clementina34.8 691e-7
MDP0000278145Malus domestica36.6 1121e-7
SapurV1A.2347s0010.1.pSalix purpurea37.1 701e-7
Ciclev10018529mCitrus clementina30.9 811e-7
Ciclev10018528mCitrus clementina30.9 811e-7
VIT_00s0238g00130.t01Vitis vinifera38.8 851e-7
Prupe.2G057800.1.pPrunus persica34.4 611e-7
SapurV1A.4753s0010.1.pSalix purpurea34.1 822e-7
Potri.013G037300.1Populus trichocarpa36.4 662e-7
Prupe.2G057800.2.pPrunus persica34.4 612e-7
Prupe.2G057800.3.pPrunus persica34.4 612e-7
orange1.1g000874mCitrus sinensis32.8 642e-7
orange1.1g017315mCitrus sinensis37.1 702e-7
orange1.1g017353mCitrus sinensis37.1 702e-7
orange1.1g017364mCitrus sinensis37.1 702e-7
Medtr4g081270.1Medicago truncatula42.2 642e-7
MDP0000123565Malus domestica33.7 982e-7
MDP0000303496Malus domestica38.3 602e-7
Ciclev10018524mCitrus clementina29.7 642e-7
Medtr2g040350.1Medicago truncatula31.5 922e-7
MDP0000295586Malus domestica33.9 622e-7
MDP0000688316Malus domestica33.7 982e-7
Glyma.02G268900.1.pGlycine max36 752e-7
MDP0000286805Malus domestica36.1 612e-7
884081Arabidopsis lyrata28.8 2052e-7
Medtr3g058870.1Medicago truncatula30 802e-7
orange1.1g000922mCitrus sinensis31.6 792e-7
Prupe.1G524000.1.pPrunus persica36.7 792e-7
SapurV1A.1405s0020.1.pSalix purpurea37.1 702e-7
Glyma.16G159700.1.pGlycine max36.7 602e-7
Potri.003G200100.1Populus trichocarpa37.1 622e-7
MDP0000290212Malus domestica34.8 923e-7
SapurV1A.0749s0010.1.pSalix purpurea33.3 873e-7
SapurV1A.1585s0040.1.pSalix purpurea33.3 873e-7
MDP0000318205Malus domestica32.5 833e-7
Ciclev10022364mCitrus clementina36.9 653e-7
Ciclev10024424mCitrus clementina39.1 643e-7
Medtr4g080060.1Medicago truncatula39.3 613e-7
MDP0000277868Malus domestica37.5 643e-7
Glyma.16G118600.1.pGlycine max26.4 1633e-7
orange1.1g037613mCitrus sinensis32 973e-7
Glyma.16G159200.1.pGlycine max35.5 623e-7
Potri.003G199100.1Populus trichocarpa38.7 753e-7
orange1.1g047161mCitrus sinensis38.5 654e-7
PGSC0003DMT400006234Solanum tuberosum37.3 674e-7
Prupe.6G152300.1.pPrunus persica34 944e-7
Gorai.003G174500.1Gossypium raimondii35.3 684e-7
Gorai.007G318800.1Gossypium raimondii30 804e-7
mrna34024.1-v1.0-hybridFragaria vesca33.9 654e-7
Medtr3g079780.1Medicago truncatula32.3 654e-7
MDP0000747568Malus domestica30.6 984e-7
orange1.1g000780mCitrus sinensis29.7 644e-7
Medtr3g058880.3Medicago truncatula31.3 674e-7
Medtr3g058880.2Medicago truncatula31.3 674e-7
Medtr3g058880.1Medicago truncatula31.3 674e-7
Phvul.010G101200.1Phaseolus vulgaris35.1 744e-7
Medtr6g088260.3Medicago truncatula41.2 684e-7
Medtr6g088260.2Medicago truncatula41.2 684e-7
SapurV1A.2186s0030.1.pSalix purpurea37.1 704e-7
orange1.1g037205mCitrus sinensis33.9 654e-7
Medtr3g058880.4Medicago truncatula31.3 674e-7
Medtr3g058880.5Medicago truncatula31.3 674e-7
Medtr6g088260.1Medicago truncatula41.2 685e-7
MDP0000188344Malus domestica38.5 655e-7
Eucgr.H01707.2.pEucalyptus grandis37 815e-7
29910.m000950Ricinus communis35.4 655e-7
Medtr2g040260.1Medicago truncatula31.5 925e-7
MDP0000457940Malus domestica37.7 615e-7
Eucgr.H01736.1.pEucalyptus grandis41.8 555e-7
Medtr3g058740.4Medicago truncatula32.3 655e-7
Gorai.003G173800.1Gossypium raimondii33.8 685e-7
Ciclev10023891mCitrus clementina43.1 515e-7
SapurV1A.1389s0020.1.pSalix purpurea37.1 706e-7
Medtr6g488300.1Medicago truncatula38.2 686e-7
orange1.1g000943mCitrus sinensis38.1 636e-7
Ciclev10024379mCitrus clementina44.7 476e-7
SapurV1A.1405s0010.1.pSalix purpurea37.1 706e-7
Manes.18G112100.1.pManihot esculenta32.3 656e-7
PGSC0003DMT400047499Solanum tuberosum40.3 676e-7
Ciclev10018914mCitrus clementina30.6 857e-7
orange1.1g045345mCitrus sinensis38.8 677e-7
Eucgr.H01707.1.pEucalyptus grandis37 817e-7
orange1.1g048215mCitrus sinensis35.9 647e-7
Glyma.01G033300.1.pGlycine max28.6 707e-7
Medtr8g042650.1Medicago truncatula38.6 577e-7
Medtr6g087200.2Medicago truncatula36.8 687e-7
29983.m003159Ricinus communis34.7 957e-7
Prupe.8G023800.3.pPrunus persica42.1 578e-7
Prupe.8G023800.2.pPrunus persica42.1 578e-7
Prupe.8G023800.1.pPrunus persica42.1 578e-7
Prupe.6G109800.1.pPrunus persica43.3 608e-7
Solyc04g056570.2.1Solanum lycopersicum32.4 1028e-7
PGSC0003DMT400040528Solanum tuberosum38.2 688e-7
Medtr2g040230.1Medicago truncatula29.2 1068e-7
Gorai.007G346900.1Gossypium raimondii41.7 608e-7
mrna34978.1-v1.0-hybridFragaria vesca32.9 798e-7
Gorai.007G344000.1Gossypium raimondii39.4 718e-7
Prupe.8G021700.1.pPrunus persica35.1 579e-7
Ciclev10018689mCitrus clementina39.1 649e-7
Ciclev10024540mCitrus clementina32.8 649e-7
Bostr.5342s0017.1.pBabiana stricta31.5 1089e-7
Gorai.003G174400.2Gossypium raimondii35.3 689e-7
Gorai.003G174400.1Gossypium raimondii35.3 689e-7

Protein sequence