List of reference genes

PRGdb IDGene nameGene descriptionSpecies
PRGDB129Asc-1Lycopersicon esculentum ASC1 (Asc) gene, Asc-1 allele, complete cds. Solanum lycopersicum
PRGDB130Bs2Capsicum chacoense disease resistance protein BS2 (BS2) mRNA, complete cds. Capsicum chacoense
PRGDB131Bs4Lycopersicon esculentum bacterial spot disease resistance protein 4 (Bs4) gene, Bs4-MM allele, complete cds. Solanum lycopersicum
PRGDB132Cf-2Lycopersicon pimpinellifolium leucine rich repeat protein Cf-2.1 gene, complete cds. Solanum pimpinellifolium
PRGDB133Cf-4Lycopersicon hirsutum Cf-4 resistance gene cluster. Solanum habrochaites
PRGDB134Cf4ALycopersicon hirsutum Cf-4 resistance gene cluster. Solanum habrochaites
PRGDB135Cf-5Lycopersicon esculentum disease resistance protein (Cf-5) gene, complete cds. Solanum lycopersicum var. cerasiforme
PRGDB136Cf-9Lycopersicon pimpinellifolium Cf-9 resistance gene cluster. Solanum pimpinellifolium
PRGDB137Cf9BLycopersicon pimpinellifolium Cf-9 resistance gene cluster. Solanum pimpinellifolium
PRGDB138Gpa2Solanum tuberosum disease resistance protein Gpa2 gene, complete cds. Solanum tuberosum
PRGDB139Gro1.4Solanum tuberosum nematode resistance protein (Gro1-4) gene, Gro1-4-P40 allele, complete cds. Solanum tuberosum
PRGDB140HeroLycopersicon esculentum hero gene for hero resistance protein, exons 2-3. Solanum lycopersicum
PRGDB141I-2Lycopersicon esculentum disease resistance protein I2 (I2) gene, complete cds. Solanum lycopersicum
PRGDB142Mi1.2Lycopersicon esculentum root-knot nematode resistance protein (Mi-1.2) mRNA, complete cds. Solanum lycopersicum
PRGDB143PtoLycopersicon pimpinellifolium Rio Grande-PtoR protein kinase mRNA, complete cds. Solanum pimpinellifolium
PRGDB144NNicotiana glutinosa virus resistance (N) gene, complete cds. Nicotiana glutinosa
PRGDB145PrfLycopersicon pimpinellifolium Rio Grande 76R Pto locus, complete sequence. Solanum pimpinellifolium
PRGDB146R1Solanum demissum late blight resistance protein (R1) gene, complete cds. Solanum demissum
PRGDB147R3aSolanum tuberosum potato late blight resistance protein R3a gene, complete cds. Solanum tuberosum
PRGDB148Rpi-blb1Solanum bulbocastanum putative disease resistant protein RGA2 gene, complete cds. Solanum bulbocastanum
PRGDB149Rpi-blb2Solanum bulbocastanum late blight resistance protein Rpi-blb2 (Rpi-blb2) gene, complete cds. Solanum bulbocastanum
PRGDB150RxSolanum tuberosum rx gene. Solanum tuberosum
PRGDB151Rx2Solanum acaule Rx2.ac15 gene for NBS-LRR protein, exons 1-3. Solanum acaule
PRGDB152RY-1Solanum tuberosum subsp. andigena ry-1 gene for resistance gene-like, exons 1-6, splice variants C38 and C19. Solanum tuberosum subsp andigena
PRGDB153Sw-5Lycopersicon esculentum tospovirus resistance protein A (Sw5-a) and tospovirus resistance protein B (Sw5-b) genes, complete cds. Solanum lycopersicum
PRGDB154Tm-2aLycopersicon esculentum ToMV-resistance locus, Tm-2^2 resistance allele, complete cds. Solanum lycopersicum
PRGDB155Ve1Lycopersicon esculentum verticillium wilt disease resistance protein (Ve1) gene, complete cds. Solanum lycopersicum
PRGDB156Ve2Lycopersicon esculentum verticillium wilt disease resistance protein Ve2 (Ve2) gene, complete cds. Solanum lycopersicum
PRGDB157Tm-2Lycopersicon esculentum ToMV-resistance locus, Tm-2 resistance allele, complete cds. Solanum lycopersicum
PRGDB1480Dm3 (RGC2B)Lactuca sativa resistance protein RGC2B (RGC2B) gene, complete cds. Lactuca sativa
PRGDB1481At1Cucumis melo aminotransferase 1 mRNA, complete cds. Cucumis melo
PRGDB1482At2Cucumis melo aminotransferase 2 mRNA, complete cds. Cucumis melo
PRGDB1483Hm1Zea mays Helminthosporium carbonum susceptibility1 (hm1), mRNA. Zea mays
PRGDB1484HRTArabidopsis thaliana viral resistance protein (HRT) gene, complete cds. Arabidopsis thaliana
PRGDB1485Hs1Beta procumbens nematode resistance (Hs1pro-1) mRNA, complete cds. Beta vulgaris
PRGDB1486L6Linum usitatissimum alternatively spliced rust resistance (L6) gene, complete cds. Linum usitatissimum
PRGDB1487MLinum usitatissimum rust resistance protein M gene, complete cds. Linum usitatissimum
PRGDB1488Pi-taOryza sativa (japonica cultivar-group) pi-ta protein (Pi-ta) gene, complete cds. Oryza sativa
PRGDB1489RCY1Arabidopsis thaliana RCY1 gene for R-protein, complete cds. Arabidopsis thaliana
PRGDB1490RFO1Arabidopsis thaliana RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1); kinase (RFO1) mRNA, complete cds. Arabidopsis thaliana
PRGDB1491RPM1Arabidopsis thaliana RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); protein binding (RPM1) mRNA, complete cds. Arabidopsis thaliana
PRGDB1492RPP13Arabidopsis thaliana RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding (RPP13) mRNA, complete cds. Arabidopsis thaliana
PRGDB1493RPP5Arabidopsis thaliana RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5) (RPP5) mRNA, complete cds. Arabidopsis thaliana
PRGDB1494RPP8Arabidopsis thaliana RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8) (RPP8) mRNA, complete cds. Arabidopsis thaliana
PRGDB1495Rps2Arabidopsis thaliana RPS2 (RESISTANT TO P. SYRINGAE 2) (RPS2) mRNA, complete cds. Arabidopsis thaliana
PRGDB1496Rps4Arabidopsis thaliana RPS4 (RESISTANT TO P. SYRINGAE 4) (RPS4) mRNA, complete cds. Arabidopsis thaliana
PRGDB1497RPS5Arabidopsis thaliana RPS5 (RESISTANT TO P. SYRINGAE 5) (RPS5) mRNA, complete cds. Arabidopsis thaliana
PRGDB1498xa21Oryza sativa Indica Group Xa21 gene for receptor kinase-like protein, complete cds, cultivar:II you 8220. Oryza sativa
PRGDB1499Hm2Zea mays NADPH HC toxin reductase-like protein (Hm2) mRNA, complete cds. Zea mays
PRGDB1500Rps1-k-2Glycine max NB-LRR type disease resistance protein Rps1-k-1 (Rps1-k-1) and NB-LRR type disease resistance protein Rps1-k-2 (Rps1-k-2) genes, complete cds. Glycine max
PRGDB1501Rps1-k-1Glycine max NB-LRR type disease resistance protein Rps1-k-1 (Rps1-k-1) and NB-LRR type disease resistance protein Rps1-k-2 (Rps1-k-2) genes, complete cds. Glycine max
PRGDB135712LeEIX1Lycopersicon esculentum EIX receptor 1 (Eix1) mRNA, complete cds. Solanum lycopersicum
PRGDB135713LeEIX2Lycopersicon esculentum EIX receptor 2 (Eix2) gene, complete cds. Solanum lycopersicum
PRGDB135714Bs3Capsicum annuum cultivar ECW-30R Bs3 (Bs3) gene, complete cds. Capsicum annuum
PRGDB135715Bs3-ECapsicum annuum cultivar ECW Bs3-E (Bs3-E) gene, complete cds. Capsicum annuum
PRGDB135718FLS2Arabidopsis thaliana FLS2 (FLAGELLIN-SENSITIVE 2); ATP binding / kinase/ protein binding / protein serine/threonine kinase/ transmembrane receptor > (FLS2) mRNA, complete cds. Arabidopsis thaliana
PRGDB135719EFRArabidopsis thaliana EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein serine/threonine kinase (EFR) mRNA, complete cds. Arabidopsis thaliana
PRGDB135720PEPR1Arabidopsis thaliana PEPR1 (PEP1 RECEPTOR 1); ATP binding / kinase/ protein binding / protein serine/threonine kinase (PEPR1) mRNA, complete cds. Arabidopsis thaliana
PRGDB135721ER - ErectaArabidopsis thaliana ER (ERECTA) (ER) mRNA, complete cds. Arabidopsis thaliana
PRGDB135722PGIPP.vulgaris pgip gene for polygalacturonase-inhibiting protein. Phaseolus vulgaris
PRGDB135723MloH.vulgare mRNA for Mlo protein. Hordeum vulgare
PRGDB135724P2Linum usitatissimum cv. 'Abyssinian' resistance-like protein P2-A (p2-A), P2 rust resistance protein, and germin-like protein genes, complete cds. Linum usitatissimum
PRGDB135725MLA10Hordeum vulgare MLA10 (Mla10) mRNA, complete cds. Hordeum vulgare
PRGDB135726RPG1Hordeum vulgare subsp. vulgare RPG1 (Rpg1) gene, Rpg1-Swiss Hv 489 allele, complete cds. Hordeum vulgare
PRGDB150957PIBOryza sativa Japonica Group mRNA for Pib, complete cds. Oryza sativa
PRGDB150958XA1Oryza sativa mRNA for XA1, complete cds. Oryza sativa
PRGDB150959RPP1Arabidopsis thaliana RPP1 (RECOGNITION OF PERONOSPORA PARASITICA 1) (RPP1) mRNA, complete cds. Arabidopsis thaliana
PRGDB150960RPP4Arabidopsis thaliana RPP4 (RECOGNITION OF PERONOSPORA PARASITICA 4) (RPP4) mRNA, complete cds. Arabidopsis thaliana
PRGDB150961RPW8.1Arabidopsis thaliana RESISTANCE TO POWDERY MILDEW8 (RPW8) locus, complete cds. Arabidopsis thaliana
PRGDB150962RPW8.2Arabidopsis thaliana RESISTANCE TO POWDERY MILDEW8 (RPW8) locus, complete cds. Arabidopsis thaliana
PRGDB150963RRS1Arabidopsis thaliana RRS1 (RESISTANT TO RALSTONIA SOLANACEARUM 1) (RRS1) mRNA, complete cds. Arabidopsis thaliana
PRGDB150964RTM1Arabidopsis thaliana RTM1 (RESTRICTED TEV MOVEMENT 1) (RTM1) mRNA, complete cds. Arabidopsis thaliana
PRGDB150965RTM2Arabidopsis thaliana RTM2 (RESTRICTED TEV MOVEMENT 2) (RTM2) mRNA, complete cds. Arabidopsis thaliana
PRGDB161432MLA1Hordeum vulgare MLA1 mRNA, complete cds. Hordeum vulgare
PRGDB161433Mla6Hordeum vulgare Mla6 gene, exons 1-5. Hordeum vulgare subsp. vulgare
PRGDB161434Mla12Hordeum vulgare subsp. vulgare MLA12 (Mla12) gene, complete cds. Hordeum vulgare subsp. vulgare
PRGDB161435MLA13Hordeum vulgare CC-NBS-LRR resistance protein MLA13 mRNA, complete cds; alternatively spliced. Hordeum vulgare
PRGDB161436Pi36Oryza sativa (indica cultivar-group) CC-NBS-LRR Pi36 (Pi36) gene, complete cds. Oryza sativa Indica Group
PRGDB161437Rp1-DZea mays rust resistance protein (Rp1-D) gene, complete cds. Zea mays
PRGDB161438Pm3Triticum aestivum powdery mildew resistance protein PM3b (Pm3) gene, Pm3-b allele, complete cds. Triticum aestivum
PRGDB161439Lr10Triticum aestivum resistance protein LR10 gene, complete cds. Triticum aestivum
PRGDB161440Pl8Helianthus annuus clone Ha-NTIR11g CC-NBS-LRR gene, complete cds. Helianthus annuus
PRGDB161441SSI4Arabidopsis thaliana TIR-NBS-LRR (SSI4) gene, complete cds. Arabidopsis thaliana
PRGDB161442Pi9Oryza sativa (indica cultivar-group) putative nitrate-induced NOI protein (75-1-127BAC12.1), putative NBS-LRR disease resistance protein (Nbs1-Pi9), putative NBS-LRR disease resistance protein (Nbs3-Pi9), and NBS-LRR disease resistance protein (Pi9) genes Oryza sativa Indica Group
PRGDB161443Piz-tOryza sativa (japonica cultivar-group) Piz-t (Piz-t) gene, complete cds. Oryza sativa Japonica Group
PRGDB161444Pi2Oryza sativa (indica cultivar-group) cultivar C101A51 chromosome 6, clones BAC70, TAC40, TAC10, TAC30 sequence. Oryza sativa Indica Group
PRGDB161446Cre1Aegilops tauschii go35 NBS-LRR (go35) gene, complete cds. Aegilops tauschii
PRGDB161447RPP27Arabidopsis thaliana rpp27 gene, exons 1-6. Arabidopsis thaliana
PRGDB161448Xa26Oryza sativa (japonica cultivar-group) bacterial blight resistance protein XA26 (Xa26) gene, complete cds. Oryza sativa Japonica Group
PRGDB161449Xa5Oryza sativa (indica cultivar-group) transcription factor IIA gamma subunit (TFIIAy) mRNA, partial cds. Oryza sativa Indica Group
PRGDB161450xa27Oryza sativa (indica cultivar-group) xa27 (xa27) gene, xa27-IR24 allele, complete cds. Oryza sativa Indica Group
PRGDB161451Xa13Oryza sativa (indica cultivar-group) cultivar IR24 disease resistant allele XA13 (Xa13) gene, complete cds. Oryza sativa Indica Group
PRGDB161452IVRNicotiana tabacum mRNA for inhibitor of virus replication (IVR)-like protein. Nicotiana tabacum
PRGDB161453Pikm1-TSOryza sativa Japonica Group Pikm1-TS mRNA for NBS-LRR class disease resistance protein, complete cds. Oryza sativa Japonica Group
PRGDB161454Pikm2-TSOryza sativa Japonica Group Pikm2-TS mRNA for NBS-LRR class disease resistance protein, complete cds. Oryza sativa Japonica Group
PRGDB161455Pid2Oryza sativa Indica Group cultivar Digu B-lectin receptor kinase (Pid2) gene, complete cds. Oryza sativa Indica Group
PRGDB161456Rdg2aHordeum vulgare subsp. vulgare cultivar Thibaut RDG2A (Rdg2) gene, Rdg2-a allele, complete cds; retrotransposon HORPIA2, complete sequence; and NBS2-RDG2A (Nbs2-Rdg2a) and NBS3-RDG2A (Nbs3-Rdg2a) genes, complete cds. Hordeum vulgare subsp. vulgare
PRGDB161457Pid3Oryza sativa Japonica Group cultivar Nipponbare resistance protein Pid3 gene, complete cds. Oryza sativa Japonica Group
PRGDB161458Pi5-1Oryza sativa Japonica Group Pi5-1 (Pi5-1) gene, complete cds. Oryza sativa Japonica Group
PRGDB161459Pi5-2Oryza sativa Japonica Group Pi5-2 (Pi5-2) gene, complete cds. Oryza sativa Japonica Group
PRGDB161460PitOryza sativa Japonica Group Pit mRNA for NBS-LRR disease resistance protein, complete cds. Oryza sativa Japonica Group
PRGDB161461Serk3ANicotiana benthamiana SERK3A (Serk3A) mRNA, complete cds. Nicotiana benthamiana
PRGDB161462Serk3BNicotiana benthamiana SERK3B (Serk3B) mRNA, complete cds. Nicotiana benthamiana
PRGDB161463Pikp-2Oryza sativa Japonica Group resistance protein Pikp-1 (Pikp-1) and resistance protein Pikp-2 (Pikp-2) genes, complete cds. Oryza sativa Japonica Group
PRGDB161464KR1Glycine max functional candidate resistance protein KR1 (KR1) mRNA, complete cds. Glycine max
PRGDB161465FOM-2Cucumis melo R-FOM-2 gene, complete cds. Cucumis melo
PRGDB161466RLM3Arabidopsis thaliana RLM3 (RESISTANCE TO LEPTOSPHAERIA MACULANS 3); ATP binding (RLM3) mRNA, complete cds. Arabidopsis thaliana
PRGDB161467RAC1Arabidopsis thaliana TIR-NBS-LRR (RAC1) gene, complete cds. Arabidopsis thaliana
PRGDB161468Lr21Triticum aestivum Lr21 gene, complete cds. Triticum aestivum
PRGDB161469Lr1Triticum aestivum Lr1 disease resistance protein (Lr1) gene, complete cds. Triticum aestivum
PRGDB161470Lr34Triticum aestivum chromosome 4 clone BAC ABCT5; BAC ABCT33 map 4A, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces. Triticum aestivum
PRGDB161471VAT Cucumis melo
PRGDB170000Sr33 Triticum aestivum
PRGDB170001Sr35 Triticum monococcum subsp. monococcum
PRGDB170002Cre3 Triticum aestivum
PRGDB170003Yr10 Triticum aestivum
PRGDB170004Ph-3 Solanum pimpinellifolium
PRGDB170005RB Solanum bulbocastanum
PRGDB170006Pia Oryza sativa Japonica Group
PRGDB170007Pi37 Oryza sativa Japonica Group
PRGDB170008Rpr1 Oryza sativa Japonica Group
PRGDB170009L3 Capsicum chinense
PRGDB170010L,L1-L11 Linum usitatissimum
PRGDB170011P,P1-4 Linum usitatissimum
PRGDB170012FOM1 Cucumis melo
PRGDB170013Hcr9-4E Solanum habrochaites
PRGDB170014Hs1pro-1 Patellifolia procumbens
PRGDB170015CEBiP Oryza sativa Japonica Group
PRGDB170016BAK1 Arabidopsis thaliana
PRGDB170017CHS3/DAR4 Arabidopsis thaliana
PRGDB170018RPP2A Arabidopsis thaliana
PRGDB170019RGA5 Oryza sativa
PRGDB170020RGA2 Arabidopsis thaliana
PRGDB170021prv Cucumis melo
PRGDB170022Rxo1 Zea mays
PRGDB170023pb1 Oryza sativa
PRGDB170024NRC1 Solanum lycopersicum
PRGDB170025Pi-Kh Oryza sativa Indica Group
PRGDB170026Pi54 Oryza sativa Indica Group
PRGDB170027Fen Solanum pimpinellifolium
PRGDB170028Pti1 Solanum lycopersicum
PRGDB170029Xa10 Oryza sativa Indica Group
PRGDB170030Xa25 Oryza sativa Indica Group
PRGDB170031PBS1 Arabidopsis thaliana
PRGDB170032NDR1 Arabidopsis thaliana
PRGDB170033Ty-1 Solanum lycopersicum
PRGDB170034Ty-3 Solanum lycopersicum
PRGDB170035Ty-5 Solanum peruvianum
PRGDB170036Pvr2 Solanum habrochaites
PRGDB170037RGA1 Hordeum vulgare
PRGDB170038ADR1 Arabidopsis thaliana
PRGDB170039Yr36 Triticum turgidum subsp. dicoccoides
PRGDB170040RPG5 Hordeum vulgare