maker_scaffold5246_snap_gene_0_50_mRNA_1 (PRGDB2175119)

Gene information

PRGdb ID	Gene name	Class	Gene type	Domain types	Species
PRGDB2175119	maker_scaffold5246_snap_gene_0_50_mRNA_1	RLP	putative	TM, LRR	Solanum commersonii

Protein domain view
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Blast search results

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Gene name hit	Species hit	Identity (%)	Length (bp)
PGSC0003DMT400073564	Solanum tuberosum	92.3	920
PGSC0003DMT400073563	Solanum tuberosum	94.1	900
Solyc01g098690.2.1	Solanum lycopersicum	91.5	917
Solyc01g098680.2.1	Solanum lycopersicum	85.2	924
maker_scaffold26345_snap_gene_0_21_mRNA_1	Solanum commersonii	38.4	2128
mrna18090.1-v1.0-hybrid	Fragaria vesca	38.2	1873
maker_scaffold8156_snap_gene_1_55_mRNA_1	Solanum commersonii	35.2	1845
OMERI01G03960.1	Oryza meridionalis	33.2	2027
ONIVA01G04510.1	Oryza nivara	34.3	1873
VIT_08s0058g00090.t01	Vitis vinifera	52.9	821

Showing 1 to 10 of 499 entries

Protein sequence

MRSDMFSQLFLILLLSICCKMSDVVAANSSKCLEDQKMLLLQLRNNLTCDSEISTKLVKWNQRIDCCQWE
GVTCNSEGQVIGLDLSAESFSGSINLLANLKFLSIVRLDGNNLSAPIPEFFAELTNLTVLSLSSCNLIGE
APQKIFQVPTLQTIDLSENEMLGGSLPEFPSKGSLQNLVLSDTKFSGSLPESIGNLRKLSRIELRACNFT
GPIPSSMENLTQLVLLDFELNSFTGSFPSFKLSKNLTRIYSARNRLTGISSDWQGFENLKYLDLSNNSIS
GLIPASVFYLPSLSDLVLSNNMFSGQITELQNVISPLTSLELSSNKLEGPIPEFLFELHDLYGLSLSFNK
FNGTVQLKKFTNLNKLVSLDLSHNSLSVDTTISESDLALLPQLNSFMLASCNLQNISFLKNQSKLSMLDL
SNNQLTGEIPNWLVEINDGLLRFLNLSFNQFTRLQEPYTIGFLMNFLDLHSNLLTGVIPLPPRAAAYIDF
SDNNFSSFPPDFGKYLVTARFLSIANNKVIGSIPSSICNSSYLEVLELSNNSLNGIIPSCLAEKSSTLKV
LNLGKNNLIGNIPEKFSYNCELQSLDLSQNHLTGVLPRSLSNCTKLKVLNIGNNKIKDTFPCWLKNMSDL
RVLVLRFNGFHGNIDCSRVSSNWTALQIMDLASNNLGGVLPRGSFLELRAMMADPSLTHSRSDILHFESS
IRPIYYQDRVTLSLKGQDVTQTKIFLFFTSIDFSSNNFVGNIPEIVGDLRSLYLLNISHNNLTGQIPPAI
GNLKQLESLDLSFNKLGGDIPEKLASLTFLSFLNLSSNELVGMIPRGNQIQTFGEISFEGNKGLCGFPLN
RTCKNNSADAPSEPEVEVDEFISRTEIYVSAILGFVVGIGIIFLPLLFSKRWNQSYNRIIDRFILRIFQQ
QDQERRTSSSIQMRSEMFSQLFLILLLSICCKTSDVVAADSSKCLEDQKMLLLQLRNKLTYYPEISTKLV
KWNQRIDCCQWEGVTCNSAGQVIGLDLSAESFSGSINLLANLKFLSIVRLDGNNLSAPIPEFFAELTNLT
VLSLSSCNLIGEAPQKIFQVPTLQTIDLSVNEMLGGSLPEFPSKGSLQNLALSYTKFSGSLPESIGNLSK
LSRVELRACNFTGPIPSSMENLTQLVLLDFNLNSFTGSFPSFKLSKNLTDIYSARNRLTGISSDWEGFEN
LKYLDLSNNSISGLIPESLFYLPSLSALFLSNNMFSGQITELQNVISPLESLELSSNKLEGPIPEFLFEL
HDLYGLSLSFNKFNGTVQLKKFTNLNKLVSLDLSHNSLSVDTNISESDLALLPQLNSFMLASCNLQNISF
LKNQSKLSMLDLSNSQLTGEIPNWLVEINDGLLRFLNLSFNQFTHLQEPYTFGFLNFLDLHSNLLTGVIP
LPPRAAAYIDFSNNNFSTFPPDFGNYLVTARFLSIANNKVIGSIPSSICNSSYLEVIELSNNSLNGIIPP
CLAEKSSTLKVLNLGKNNLIGNIPEKFSYNCELQSLDLSQNHLTGVLPRSLSNCTKLKVINIGNNKIKDT
FPCWLKNMSDLRVLVLRFNGFHGNIDCSRVSSNWTALQIMDLASNNLGGVLPRGSFLELKGMMADPSLTH
SRSDILHFESQSVRSVYYQDRVTLSHKGQDVTQTKIFLFFTSIDFSSNNFVGNIPEIVGDLRSLYLLNIS
HNNLTGQIPPEIGNLKQLESLDLSFNKLGGNIPEKLASLTFLSLINLSYNELVGMIPRGNQIQTFGESSF
EGNKGLCGLPLNRTCKNNSADAPSEPEVEEDEFISRTEIYVSAILGFVVVTARFLSIANNKVIGSIPSSI
CNSSYLEVIELSNNSLNGIIPPCLAEKSSTLKVLNLGKNNLIGNIPEKFSYNCELQSLDLSQNHLTGVLP
RSLSNCTKLKVINIGNNKIKDTFPCWLKNMSDLRVLVLRFNGFHGNIDCSRVSSNWTALQIMDLASNNLG
GVLPRGSFLELKGMMADPSLTHSRSDILHFESQSVRSVYYQDRVTLSHKGQDVTQTKIFLFFTSIDFSSN
NFVGNIPEIVGDLRSLYLLNISHNNLTGQIPPEIGNLKQLESLDLSFNKLGGNIPEKLASLTFLSLINLS
YNELVGMIPRGNQIQTFGESSFEGNKGLCGLPLNRTCKNNSADAPSEPEVEEDEFISRTEIYVSAILGFV
VGVGIIFLPLLFSKRWSQSYNRTIDRLILRIFQQQNQERRTSSSSVASWKKASGKARGRH