augustus_masked_scaffold2979_abinit_gene_0_7_mRNA_1 (PRGDB2176508)

Gene information

PRGdb ID	Gene name	Class	Gene type	Domain types	Species
PRGDB2176508	augustus_masked_scaffold2979_abinit_gene_0_7_mRNA_1	N	putative	NBS, TM	Solanum commersonii

Protein domain view
Position :
0
Zoom :
x 1
Show help

Blast search results

Show entries

Search:

Gene name hit	Species hit	Identity (%)	Length (bp)
PGSC0003DMT400047452	Solanum tuberosum	81.3	1255
Solyc05g007610.2.1	Solanum lycopersicum	81.9	1201
Solyc05g007630.2.1	Solanum lycopersicum	77.3	1219
Solyc05g007640.2.1	Solanum lycopersicum	51.6	1207
PGSC0003DMT400047451	Solanum tuberosum	52.2	1154
augustus_masked_scaffold2979_abinit_gene_0_5_mRNA_1	Solanum commersonii	51.8	1209
PGSC0003DMT400059360	Solanum tuberosum	50.2	1238
genemark_scaffold3279_abinit_gene_0_11_mRNA_1	Solanum commersonii	48.7	1231
Solyc05g007350.1.1	Solanum lycopersicum	47.1	1235
PGSC0003DMT400059361	Solanum tuberosum	52.4	1013

Showing 1 to 10 of 499 entries

Protein sequence

MNYQILQSVQHLEDQWGLDMPESLEDGMKFLKREFTFLDFFLNLQSFIDLSYMLEIVHNVQALFHDAAID
FGGSSEIDQVVRVTNQLQVKIQMTKLEIRSEYSFPKVNKDGIVVTPKFVIDFIDTVVLNLGNLLKVYCSS
SLLFVRGPNKEIRDVFKELKLLRNFVCFITDRFIELKSQHIDFFIHVLEVTSHAAMVAWLFLPSNDNENQ
KTNGLLSYHLQMKIKPIDPSIRKIYIDVLQALRSEWRPIIPINHVADCVAGFVETLQHNLKALAVSNPNT
HQIADLQKMLNLLIANLSIQDLEFHLQDIDTVMIDSGILVYSLCEDVVLGEVTIDLPGTIERIKILIYNI
IRKEFQSSLPRIHGLGYVDFVLRNLNEFQDRYPDSLAFMKIQLQKIQKELESVQPFLRFVAEQQYNIPDK
LQNSVSLLIGKAYEVEYVVDACVSKRVPDWCLMLWLVDISAEVAEMQQKKLFEVDLVSPYTIVTDPSGKS
SELEKMPGFKEEIIGFEDEIGTLIDRLTQGSRELDIISIVGMPGTGKTTLANRLYSYGSVVSHFDIRAYC
QVSPVYSHRGLILSLLAMLHVSIDETSLLSEETDELKDILSKILRSNRYLILLDDVWNPKAWDDLKCCFP
DVKQGSRIVLTTRNRDVAYYVKSVNKPYHLSLLTYEESWELLKMKVFGNGSCSPHLEKVGQEIVRKCGGL
RLSIVLVAGILSKIEQTEECWSEVAKHLGINMLSALNDIIEQSYQHLPYHLKSCFLYFGTFLEFKEINVS
KLTWMWIGEGFVNDLESKSLQDIVRGYLENLIRRNLVMNAKRSSDGNVKACRVPDPLIDFCKKKAAEEHF
LSWIKWDQSDKSLLGISSRKQLAQRRLAFYCEEENLVKWSSSCYLVDSVHFGEDKRTNVSSRQVPQIFYN
FKFLKVLNLESTVINSFPTVLVYLRYFAAQTDQDSITSLIANLWNLETLILKPTKGELKLPVTIMKMVRL
RHLCIDNAYFTLNGVKGLLEKLEVLFTPCFSCAKDVELVVQKTPNLRELRCSFVDFRQECLPCLNFLETL
EIHLAADSTVSGPYIFPATLRNLTLSNFFLGSCHESNISMLPNLCILKLVSIFFDNDKWEVRASEFLKLT
VLKLVKCEFLEEWIVSNDAFPILEHLVLRECPYLKEIPVCFDKVLLKSIKLKPFSESVEQSVTAIKQYLK
QKNRDRLSGTLLRKCNYMSLSFTHL