genemark_scaffold3930_abinit_gene_0_10_mRNA_1 (PRGDB2176517)

Gene information

PRGdb ID	Gene name	Class	Gene type	Domain types	Species
PRGDB2176517	genemark_scaffold3930_abinit_gene_0_10_mRNA_1	CNL	putative	CC, NBS, TM, LRR	Solanum commersonii

Protein domain view
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Gene name hit	Species hit	Identity (%)	Length (bp)
Rpi-blb2	Solanum bulbocastanum	81.2	1279
Solyc06g008790.2.1	Solanum lycopersicum	80.4	1273
Solyc06g008450.2.1	Solanum lycopersicum	80.5	1278
Mi1.2	Solanum lycopersicum	79.6	1279
PGSC0003DMT400065581	Solanum tuberosum	80.5	1259
Solyc06g008400.1.1	Solanum lycopersicum	79.4	1281
maker_scaffold31747_snap_gene_0_22_mRNA_1	Solanum commersonii	74.7	1373
Solyc06g008800.1.1	Solanum lycopersicum	79	1276
Solyc06g008770.1.1	Solanum lycopersicum	78.6	1276
maker_scaffold21230_augustus_gene_0_21_mRNA_1	Solanum commersonii	74.7	1352

Showing 1 to 10 of 499 entries

Protein sequence

MEKQKDNEEANNSLDIADILDFLERLENEENQKALDKDQVEKLKLELAFICTYVQLSYCNLEQFEDIMTR
KRQEVENLLQPILDDEGKDIGCKYVLTSLACNMDDCISLYHRSSKSDATMMNEQLDFLLLNLYHLSKYRA
EKMFPGVTQYEVLQNVCGNIRAFHGLIVNGCIKHEMVENVLPLFQLMAERVGHFLWEDQTDEDSQLSELD
ENDQTDENAQLSDLDEDDQNDRDSRLFKLAHLLLKIVPTELEVMHICYTNLEASTSAEVGRFIKKLLETS
PDILREYLIHLQEHMITVITPSTSGARNIHVMMEFLLIILSDMPKDFIHHDKLFDLLARVGALTREVSTL
VHDLEEKLRNKEGNDQTNRAILDLLENIELLKKDLKHVYLKAPDSSQCCFPMSDGPLFMHLLHIHLNDLL
DSNAYSIALIREEIELVKQDLELIRSFLLNVEQEMYKDLWARVLNVAYEAKDVIDSIIVRDNGLLHLIFS
LPITINKIKLIKEEVSDLHEKIPKNRGLVVVKSPKKLVESESSPAGKITVGFEEETNWLMRKLTSGPADL
DVISITGMPGSGKTTLAYKVYNDKSVSSHFDLRAWCTVDQGYDEKKLLDKIFNQVSDSDSKLSENIDVAD
KLRKQLYGKRYLIVLDDVWDTTTWDELTRPFPKVVKGSRIILTTRKKEVALHGKLCTAPLNLRLLRSEES
WELLEKRAFGNESCPVELLDVGKEIAENCKGLPLVADLIAGVIAGREKKRSVWLEFLNNLHSFILKNEVE
NEVEVMKVIEISYDHLPDHLKPCLLYFASWPKDTAVTIYELKVLLEAEGFVEKTEMKSMEEMVKIYMDDL
ISSSLVICFKEIRDEPACQVHDLVHDFCLIKVRKEKLFDQISSIAPSDLLPRLITIDYDEEHFGLNFVLF
GLNKKRHSGKHLYSLRINGDKLDDYHSDTFHLRHLRLLRVLFLYPSFITANDSLLNEICMLNHLRYLRIG
TQVKSLPLSFSNLWNLEILWVINGESTLILLPIVWDLVKLRILHVDTLSFFDMDTDEPILVAEDTKLESL
RYLNNLVLSYWKDTEDIFKRLPNLQVLGIHLKESWDYSTEQFWFPKLDYLTKLEELGVSFKSSNINDNSE
PSVVKNRPWDFHFPSSLKNLLLNDFPLTSDSLSTIAILPNLEKLTLRRTIIHGEEWNMGEEDTFENLKIL
KLYQVALSKWEVGEESFPALKKLKLKGCCKLEEIPPSFGDIWSLKIIKLVESPQLKDSAMKIKEYAEDMR
GGDELQVLLHSIAVLIPVVANVKRCLQCV