mrna23444.1-v1.0-hybrid (PRGDB236085)

Gene information

PRGdb IDGene nameClassGene typeDomain typesSpecies
PRGDB236085mrna23444.1-v1.0-hybridNputativeNBSFragaria vesca

Protein domain view
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100200300400500600700800900SequenceDomains

Blast search results

Gene name hitSpecies hitIdentity (%)Length (bp)E-value
MDP0000459257Malus domestica81.7 6760
MDP0000664074Malus domestica81.7 6760
Prupe.2G206900.1.pPrunus persica80.8 6890
VIT_13s0019g05090.t01Vitis vinifera74.8 6870
28462.m000128Ricinus communis73.4 6870
Eucgr.J01045.2.pEucalyptus grandis73.3 6860
Eucgr.J01045.1.pEucalyptus grandis73.3 6860
Ciclev10030851mCitrus clementina72.5 6580
Gorai.011G235200.1Gossypium raimondii69.1 7110
Manes.07G094300.1.pManihot esculenta71.4 6920
orange1.1g005344mCitrus sinensis70.6 6900
Glyma.20G113300.1.pGlycine max71.3 6770
DCAR_019064Daucus carota69.9 6640
Glyma.20G113300.2.pGlycine max71.2 6770
Gorai.011G235200.2Gossypium raimondii68.3 7110
Migut.F01708.1.pErythranthe guttata65 7290
Thecc1EG043323t1Theobroma cacao69.1 6860
Solyc11g008250.1.1Solanum lycopersicum65.1 7330
Phvul.007G025200.1Phaseolus vulgaris71.1 6710
AHYPO_010835-RAAmaranthus hypochondriacus69.9 6450
Thhalv10020197mEutrema salsugineum68.4 6740
Cucsa.317360.1Cucumis sativus64.1 7150
Kalax.0009s0225.1.pKalanchoe marnieriana68.7 6700
evm_27.model.AmTr_v1.0_scaffold00002.359Amborella trichopoda66.3 6710
Cagra.0834s0040.1.pConradina grandiflora67.5 6850
897221Arabidopsis lyrata68.5 6600
Aco017427.1Ananas comosus67.8 6400
Spipo3G0088100Spirodela polyrhiza75 5350
Sevir.2G068400.1.pSetaria viridis65.4 6440
Seita.2G065100.1.pSetaria italica65.4 6440
GRMZM2G147819_P01Zea mays62.7 6620
Sobic.002G060800.1.pSorghum bicolor63.8 6680
Zosma159g00410.1Zostera marina65.9 6100
GSMUA_Achr9P25490_001Musa acuminata67.2 6010
LOC_Os07g08970.1Oryza sativa64.3 6500
BGIOSGA024697-PAOryza sativa Indica Group64.2 6500
Bradi1g55007.1.pBrachypodium distachyon64 6200
ORGLA07G0047300.1Oryza glaberrima64 6470
Brast06G193000.1.pBrachypodium stacei65 6110
LPERR07G04910.1Leersia perrieri66 6150
MLOC_37192.3Hordeum vulgare65.4 5980
OB07G14200.1Oryza brachyantha67.9 5740
Pavir.Bb00532.1.pPanicum virgatum69.9 5480
Kalax.1412s0004.1.pKalanchoe marnieriana77.5 4760
Pavir.J39429.1.pPanicum virgatum70.8 5060
OGLUM07G05190.1Oryza glumaepatula63.8 5960
EMT32079Aegilops tauschii59.1 6500
AT3G10420.1Arabidopsis thaliana67.8 5430
TRIUR3_28582-P1Triticum urartu63.4 5680
MLOC_37192.2Hordeum vulgare65.6 5110
OBART07G05640.1Oryza barthii63.7 5560
PGSC0003DMT400079820Solanum tuberosum65.3 5040
Medtr1g111400.2Medicago truncatula69.6 4730
Bradi1g55007.2.pBrachypodium distachyon62.5 5090
MLOC_37192.1Hordeum vulgare66.3 4510
VIT_19s0014g01660.t01Vitis vinifera54.5 5470
Aqcoe4G059500.1.pAquilegia caerulea49.3 6250
Aqcoe4G059300.1.pAquilegia caerulea49 6250
augustus_masked_scaffold10769_abinit_gene_0_4_mRNA_1Solanum commersonii56.9 5840
Manes.15G091200.2.pManihot esculenta51.1 5710
Manes.15G091200.1.pManihot esculenta51.1 5710
Spipo26G0020800Spirodela polyrhiza51.1 5690
Prupe.4G171000.3.pPrunus persica54.1 5530
mrna27174.1-v1.0-hybridFragaria vesca53.4 5660
30192.m000553Ricinus communis48.8 6170
GSMUA_Achr6P14420_001Musa acuminata53 5430
Lus10015985Linum usitatissimum51 5760
OB06G13360.1Oryza brachyantha53.2 5512e-180
Lus10012291Linum usitatissimum50.4 5677e-180
evm_27.model.AmTr_v1.0_scaffold00021.107Amborella trichopoda53 5247e-180
Cucsa.122710.1Cucumis sativus51 5801e-179
DCAR_019588Daucus carota49.4 6072e-179
Phvul.011G160500.1Phaseolus vulgaris52.1 5572e-179
Araha.10643s0006.1.pArabidopsis halleri50.5 5828e-177
Cagra.4894s0027.1.pConradina grandiflora50.1 5893e-176
Bo00796s020.1Brassica oleracea46.9 6446e-176
316268Arabidopsis lyrata50.2 5821e-175
AHYPO_004473-RAAmaranthus hypochondriacus49 5941e-175
Zosma40g00340.1Zostera marina49.1 5912e-175
Aco010669.1Ananas comosus50 5622e-175
Thhalv10018237mEutrema salsugineum50.9 5601e-173
Phvul.011G160500.2Phaseolus vulgaris54.1 4627e-162
Solyc12g014150.1.1Solanum lycopersicum52.7 4639e-160
Migut.M00749.1.pErythranthe guttata53.5 4524e-157
GRMZM2G011319_P01Zea mays57.2 4287e-155
Thecc1EG031707t2Theobroma cacao60 3855e-154
Medtr8g463650.4Medicago truncatula66.5 3373e-152
Aqcoe4G059500.3.pAquilegia caerulea60.3 3754e-152
Medtr8g463650.3Medicago truncatula66.5 3376e-152
AT1G73170.2Arabidopsis thaliana51.9 4937e-152
Prupe.4G171000.2.pPrunus persica64.6 3452e-148
Aqcoe4G059300.2.pAquilegia caerulea51.3 4642e-144
Glyma.10G276400.1.pGlycine max88.5 2262e-130
Vocar.0006s0406.1.pVolvox carteri57.4 3474e-118
473506Arabidopsis lyrata56.5 3402e-117
Cagra.15831s0001.1.pConradina grandiflora54.9 3574e-116
Araha.8824s0001.1.pArabidopsis halleri55.4 3526e-116
AT1G33290.1Arabidopsis thaliana55.5 3488e-116
Thhalv10007949mEutrema salsugineum59 3173e-115
Bostr.3359s0041.1.pBabiana stricta54.5 3545e-114
Cre12.g496150.t1.2Chlamydomonas reinhardtii56.8 3381e-112
93368Micromonas58.6 3146e-112
Seita.4G069100.4.pSetaria italica60.5 3061e-111
29827.m002664Ricinus communis56.6 3161e-109
13766Coccomyxa subellipsoidea56.4 3076e-109
mrna31188.1-v1.0-hybridFragaria vesca52.3 3467e-107
DCAR_010122Daucus carota50.1 3635e-105
Migut.C01410.1.pErythranthe guttata47.5 3925e-102
Solyc04g005830.2.1Solanum lycopersicum51.3 3455e-102
Prupe.8G001000.3.pPrunus persica60.2 2642e-98
PGSC0003DMT400007381Solanum tuberosum51.2 3241e-97
PGSC0003DMT400007385Solanum tuberosum59.9 2592e-96
Ciclev10021810mCitrus clementina59.5 2473e-87
Ciclev10021813mCitrus clementina59.5 2473e-87
orange1.1g025371mCitrus sinensis59.5 2473e-87
orange1.1g027392mCitrus sinensis61.8 2078e-80
orange1.1g027390mCitrus sinensis61.8 2078e-80
Dusal.0110s00013.1.pDunaliella salina43.6 3266e-66
ORGLA12G0184700.1Oryza glaberrima86.1 1227e-63
Dusal.0110s00012.1.pDunaliella salina48.6 2203e-60
Dusal.0110s00012.2.pDunaliella salina48 2021e-53
AT1G33290.2Arabidopsis thaliana52.7 2013e-52
evm.model.supercontig_131.69Carica papaya59.1 1374e-47
GSMUA_Achr6P12640_001Musa acuminata50.7 1523e-36
PGSC0003DMT400007383Solanum tuberosum43.8 1769e-36
PGSC0003DMT400007382Solanum tuberosum43.8 1769e-36
MDP0000121145Malus domestica40.3 671e-8
OBART10G02510.1Oryza barthii32 781e-7
ORUFI10G02530.1Oryza rufipogon32 781e-7
OBART10G02510.2Oryza barthii32 781e-7

Protein sequence

MRALSSQLVLLDLQTSWHSANQIPISTLCYLHTSKLSSSFRRTRGAHKSIASSRHSSTSPAPEIRRPSDR
FFSGNSPSSSSGSSASTSRTEMEMFLELLPERMKSELYRHEEIGKLIEVVMDLGRPPIARFPTGDWVISE
TPVSHEDLRLAVSKVSEFSDDNRSGINNSLHRISAIRNRKLQIIGLTCRVGRAVSGSAEVIRDLVEGGGS
ILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHNIMIE
AVENHMPQTIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIIKNPSLQILVGGIESVTLGDEEAR
KRKVQKTILERKGPPTFTCAVEIISKTEFRVHHRLDATVDAILAGKSPLFEVRRIDADADDSCMPTQISE
HNYLKASDFVVTTDIVASVLESDEEDLDPPPNVSRRLSSDKSAKKRSSPILEADLLQVAKVMGLEDEIEV
SDDIGTADAIIASSAEMKQNPWIRSVAKFHQLPVFVMKSNTMAQIVKAVRMILEMESVGSLPKQLVNNSF
DIEIEDDAPKRKPSLEEIDALEEVRLAIEYIVIPGGEAVELLPRCSEIIARQLELVESYQLAAENSGTKR
NPRLQILPMRINKKSSSKPVKSGSIKSTNSKSLTGGGGGEKEIQSKTEAIEREAEAVRVWVQTKIHRVKE
RKREMAGREEYRIFVGGLAYEVTEHELESAFARFGKVHEAQIMLERDTKRPRGFGFITFGDRRAMEDAIR
EMHGQELGSRTISVNKAQPRMGGEDSDHGYRGGGGGGGYSSGGRRSYGGGGDRSVGQDECFKCGRTGHWA
RDCPSAGGGRGGGGGSFSSHSRFGGGGRVDRFGGDHDRYMDDRYDGGRYGDRDRFDSREDKYGSRDRYVS
DRYPAGDRFASDRYGGSDRYPQNGYGKDRGYDRDGGVRGGSDRYGRGGPARDEGGYRSRAGPYDRPSRGG
RPSSFDRY