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NCBI Species: 3702

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List of reference R-genes

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PRGdb ID	Gene Name	Class	Agent	Avr	Pest/Disease	View
PRGDB135718	FLS2	RLK				View
PRGDB135719	EFR	RLK				View
PRGDB135720	PEPR1	RLK				View
PRGDB135721	ER - Erecta	RLK	Ralstonia solanacearum		Bacterial wilt of potato	View
PRGDB1484	HRT	CNL	Turnip crinkle virus		Turnip crinkle virus	View
PRGDB1489	RCY1	CNL	Cucumber mosaic virus		Cucumber Mosaic Virus	View
PRGDB1491	RPM1	CNL	Pseudomonas syringae	avrRpm1	Bacterial Blight	View
PRGDB1491	RPM1	CNL	Xanthomonas oryzae	avrRpm1	Bacterial Blight	View
PRGDB1492	RPP13	CNL	Pseudoperonospora cubensis		Downy mildew of cucurbits	View
PRGDB1493	RPP5	TNL	Pseudoperonospora cubensis		Downy mildew of cucurbits	View

Showing 1 to 10 of 66 entries

List of putative R-genes

PRGdb ID	Gene name	Genome version	Class	View
PRGDB3348243	AT5G47260	447_Araport11	CNL	View
PRGDB3348244	AT4G14350	447_Araport11	CK	View
PRGDB3348245	AT1G63730	447_Araport11	TNL	View
PRGDB3348246	AT4G14350	447_Araport11	CK	View
PRGDB3348247	AT4G11330	447_Araport11	KIN	View
PRGDB3348248	AT1G75640	447_Araport11	RLK	View
PRGDB3348249	AT1G21240	447_Araport11	KIN	View
PRGDB3348250	AT1G21240	447_Araport11	KIN	View
PRGDB3348251	AT4G28570	447_Araport11	KIN	View
PRGDB3348252	AT4G28570	447_Araport11	KIN	View

List of scientific literature with expression data

Author	Reference	Pathogen lineage	Pathogen name
Coolen et al., 2016	Coolen S, Proietti S, Hickman R, Davila Olivas NH, Huang PP, Van Verk MC, Van Pelt JA, Wittenberg AH, De Vos M, Prins M, Van Loon JJ, Aarts MG, Dicke M, Pieterse CM, Van Wees SC. Transcriptome dynamics of Arabidopsis during sequential biotic and abiotic stresses. Plant J. 2016 May;86(3):249-67. doi: 10.1111/tpj.13167. PMID: 26991768.	Fungus; Insect	Botrytis cinerea, Pieris rapae
Fallath et al., 2017	Fallath T, Kidd BN, Stiller J, Davoine C, Björklund S, Manners JM, Kazan K, Schenk PM. MEDIATOR18 and MEDIATOR20 confer susceptibility to Fusarium oxysporum in Arabidopsis thaliana. PLoS One. 2017 Apr 25;12(4):e0176022. doi: 10.1371/journal.pone.0176022. PMID: 28441405; PMCID: PMC5404846.	Fungus	Fusarium oxysporum
Gao et al., 2020	Gao R, Liu P, Yong Y, Wong SM. Author Correction: Genome-wide transcriptomic analysis reveals correlation between higher WRKY61 expression and reduced symptom severity in Turnip crinkle virus infected Arabidopsis thaliana. Sci Rep. 2020 Nov 10;10(1):19762. doi: 10.1038/s41598-020-75427-5. Erratum for: Sci Rep. 2016 Apr 18;6:24604. PMID: 33173078; PMCID: PMC7655848.	Virus	Turnip crinkle virus
Howard et al., 2013	Howard BE, Hu Q, Babaoglu AC, Chandra M, Borghi M, Tan X, He L, Winter-Sederoff H, Gassmann W, Veronese P, Heber S. High-throughput RNA sequencing of pseudomonas-infected Arabidopsis reveals hidden transcriptome complexity and novel splice variants. PLoS One. 2013 Oct 1;8(10):e74183. doi:	Bacterium	Pseudomonas syringae
Schroeder et al., 2019	Schroeder MM, Lai Y, Shirai M, Alsalek N, Tsuchiya T, Roberts P, Eulgem T. A novel Arabidopsis pathosystem reveals cooperation of multiple hormonal response-pathways in host resistance against the global crop destroyer Macrophomina phaseolina. Sci Rep. 2019 Dec 27;9(1):20083. doi: 10.1038/s41598-019-56401-2. PMID: 31882671; PMCID: PMC6934584.	Fungus	Macrophomina phaseolina
Su et al., 2018	Su X, Lu G, Guo H, Zhang K, Li X, Cheng H. The dynamic transcriptome and metabolomics profiling in Verticillium dahliae inoculated Arabidopsis thaliana. Sci Rep. 2018 Oct 18;8(1):15404. doi: 10.1038/s41598-018-33743-x. PMID: 30337674; PMCID: PMC6193927.	Fungus	Verticillium dahliae
Sucher et al., 2020	Sucher J, Mbengue M, Dresen A, Barascud M, Didelon M, Barbacci A, Raffaele S. Phylotranscriptomics of the Pentapetalae Reveals Frequent Regulatory Variation in Plant Local Responses to the Fungal Pathogen Sclerotinia sclerotiorum. Plant Cell. 2020 Jun;32(6):1820-1844. doi: 10.1105/tpc.19.00806. Epub 2020 Apr 7. PMID: 32265317; PMCID: PMC7268813.	Fungus	Sclerotinia sclerotiorum
Zhu et al., 2013	Zhu QH, Stephen S, Kazan K, Jin G, Fan L, Taylor J, Dennis ES, Helliwell CA, Wang MB. Characterization of the defense transcriptome responsive to Fusarium oxysporum-infection in Arabidopsis using RNA-seq. Gene. 2013 Jan 10;512(2):259-66. doi: 10.1016/j.gene.2012.10.036. Epub 2012 Oct 27. PMID: 23107761.	Fungus	Fusarium oxysporum
Zhu et al., 2018	Zhu L, Guo J, Ma Z, Wang J, Zhou C. Arabidopsis Transcription Factor MYB102 Increases Plant Susceptibility to Aphids by Substantial Activation of Ethylene Biosynthesis. Biomolecules. 2018 Jun 7;8(2):39. doi: 10.3390/biom8020039. PMID: 29880735; PMCID: PMC6023100.	Aphid	Myzus persicae (GPA)