maker_scaffold6479_augustus_gene_0_35_mRNA_1 (PRGDB2174869)

Gene information

PRGdb IDGene nameClassGene typeDomain typesSpecies
PRGDB2174869maker_scaffold6479_augustus_gene_0_35_mRNA_1CLputativeCC, LRRSolanum commersonii

Protein domain view

Blast search results

Gene name hitSpecies hitIdentity (%)Length (bp)E-value
PGSC0003DMT400014488Solanum tuberosum98.2 9640
maker_scaffold6479_augustus_gene_0_35_mRNA_2Solanum commersonii99.9 8580
PGSC0003DMT400014490Solanum tuberosum98.5 8580
PGSC0003DMT400014489Solanum tuberosum98.5 8580
PGSC0003DMT400014487Solanum tuberosum98.5 8580
Phvul.002G331100.1Phaseolus vulgaris52.2 9860
mrna09363.1-v1.0-hybridFragaria vesca50.2 10140
MDP0000136639Malus domestica51.6 9890
Potri.015G036300.5Populus trichocarpa51.5 9820
Potri.015G036300.4Populus trichocarpa51.5 9820
Potri.015G036300.3Populus trichocarpa51.5 9820
Potri.015G036300.1Populus trichocarpa51.5 9820
SapurV1A.0082s0160.3.pSalix purpurea51.6 9850
Potri.012G045300.3Populus trichocarpa51.4 9830
SapurV1A.0082s0160.2.pSalix purpurea51.6 9850
SapurV1A.0082s0160.1.pSalix purpurea51.6 9850
Potri.012G045300.1Populus trichocarpa51.4 9830
Glyma.08G055400.2.pGlycine max51.2 9720
SapurV1A.0983s0030.3.pSalix purpurea50.2 9850
Potri.015G036300.2Populus trichocarpa51 9520
SapurV1A.0082s0160.5.pSalix purpurea51.3 9540
SapurV1A.1765s0020.1.pSalix purpurea50.4 9850
SapurV1A.0082s0160.4.pSalix purpurea51.3 9540
Potri.012G045300.2Populus trichocarpa51.4 9520
SapurV1A.0983s0030.1.pSalix purpurea50.2 9850
AHYPO_012439-RAAmaranthus hypochondriacus47.7 10150
Migut.D01318.1.pErythranthe guttata58.9 7850
Medtr8g107440.2Medicago truncatula53.6 8490
Potri.012G045300.4Populus trichocarpa50 9390
891676Arabidopsis lyrata46 10010
Carubv10008157mCapsella rubella42.2 12050
Cagra.1131s0007.1.pConradina grandiflora42.1 12050
AT1G48540.2Arabidopsis thaliana46.5 9760
AT1G48540.1Arabidopsis thaliana46.5 9760
Thhalv10011201mEutrema salsugineum46.1 9940
Spipo15G0033600Spirodela polyrhiza45.6 10060
29653.m000297Ricinus communis69.4 4940
Manes.06G004700.5.pManihot esculenta58.2 6240
Manes.06G004700.2.pManihot esculenta57.9 6240
Manes.06G004700.1.pManihot esculenta57.9 6240
Bostr.25219s0546.2.pBabiana stricta55.9 6320
Aco013434.1Ananas comosus56.3 6500
Bostr.25219s0546.1.pBabiana stricta55.9 6320
Araha.0881s0004.1.pArabidopsis halleri55.7 6270
GSMUA_Achr10P26010_001Musa acuminata63.1 5070
898146Arabidopsis lyrata65.1 4780
Araha.1272s0013.1.pArabidopsis halleri64.6 4780
Zosma32g00810.1Zostera marina52.7 6300
SapurV1A.1765s0020.2.pSalix purpurea44.8 8260
SapurV1A.0983s0030.2.pSalix purpurea44.7 8260
Lus10017994Linum usitatissimum52.1 5391e-167
VIT_17s0000g02170.t01Vitis vinifera83.6 2324e-129
Manes.06G004700.4.pManihot esculenta48.6 4423e-116
Manes.06G004700.3.pManihot esculenta48.6 4427e-115
TRIUR3_19918-P1Triticum urartu45.9 4736e-108
Traes_4AS_B5BB2D3A9.12Triticum aestivum67.9 1934e-84
Glyma.01G117600.1.pGlycine max68.2 1261e-50
Cre14.g618750.t1.1Chlamydomonas reinhardtii34 1501e-12
mrna28663.1-v1.0-hybridFragaria vesca27.8 2841e-10
Cre02.g092850.t1.2Chlamydomonas reinhardtii33.1 1422e-10
Glyma.06G102700.1.pGlycine max31.8 1546e-10
Potri.002G097800.1Populus trichocarpa29.9 1678e-10
Prupe.1G518600.2.pPrunus persica26.7 2661e-9
Prupe.1G518600.3.pPrunus persica26.7 2881e-9
Prupe.1G518600.1.pPrunus persica26.7 2881e-9
Pp3c7_11340V3.6.pPhyscomitrella patens31.6 1522e-9
Pp3c7_11340V3.5.pPhyscomitrella patens31.6 1522e-9
Phvul.009G031700.2Phaseolus vulgaris31.8 1542e-9
Phvul.009G031700.1Phaseolus vulgaris31.8 1542e-9
Pp3c7_11340V3.4.pPhyscomitrella patens31.6 1522e-9
Pp3c7_11340V3.2.pPhyscomitrella patens31.6 1522e-9
Pp3c7_11340V3.1.pPhyscomitrella patens31.6 1522e-9
Pp3c7_11340V3.3.pPhyscomitrella patens31.6 1522e-9
Glyma.04G101000.1.pGlycine max31.8 1543e-9
Glyma.04G101000.3.pGlycine max31.8 1543e-9
Glyma.04G101000.2.pGlycine max31.8 1543e-9
Pp3c7_11340V3.14.pPhyscomitrella patens31.6 1523e-9
Pp3c7_11340V3.13.pPhyscomitrella patens31.6 1523e-9
Pp3c7_11340V3.12.pPhyscomitrella patens31.6 1523e-9
Pp3c7_11340V3.8.pPhyscomitrella patens31.6 1523e-9
Pp3c7_11340V3.9.pPhyscomitrella patens31.6 1523e-9
Pp3c7_11340V3.7.pPhyscomitrella patens31.6 1523e-9
Pp3c7_11340V3.10.pPhyscomitrella patens31.6 1523e-9
Phvul.008G173900.2Phaseolus vulgaris32.9 1553e-9
Phvul.008G173900.1Phaseolus vulgaris32.9 1553e-9
DCAR_019222Daucus carota31.2 1545e-9
Thecc1EG034886t1Theobroma cacao29.5 1665e-9
Thecc1EG034886t2Theobroma cacao29.5 1665e-9
CDF36031Chondrus crispus27 2305e-9
Cucsa.311500.4Cucumis sativus31.2 1546e-9
Ciclev10000471mCitrus clementina30.1 1667e-9
Medtr5g064040.1Medicago truncatula32.9 1557e-9
Eucgr.B00027.1.pEucalyptus grandis27.5 2297e-9
Dusal.0106s00019.1.pDunaliella salina29.7 1387e-9
Manes.18G066400.1.pManihot esculenta30.1 1669e-9
orange1.1g006421mCitrus sinensis29.5 1661e-8
orange1.1g006432mCitrus sinensis29.5 1661e-8
orange1.1g006427mCitrus sinensis29.5 1661e-8
Cre05.g234655.t1.1Chlamydomonas reinhardtii30.8 1981e-8
Kalax.0290s0017.2.pKalanchoe marnieriana30.1 1662e-8
Kalax.0290s0017.1.pKalanchoe marnieriana30.1 1662e-8
Glyma.14G174400.1.pGlycine max31 1552e-8
Glyma.14G174400.2.pGlycine max31 1552e-8
Glyma.14G174400.3.pGlycine max31 1552e-8
GSMUA_AchrUn_randomP21030_001Musa acuminata33.1 1542e-8
SapurV1A.0239s0130.2.pSalix purpurea27.1 1922e-8
SapurV1A.0239s0130.3.pSalix purpurea27.1 1922e-8
SapurV1A.0239s0130.1.pSalix purpurea27.1 1922e-8
Kalax.0239s0056.2.pKalanchoe marnieriana29.5 1663e-8
Kalax.0239s0056.1.pKalanchoe marnieriana29.5 1663e-8
ConsensusfromContig12138-snap_masked-ConsensusfromContig12138-abinit-gene-0.1-mRNA-1:cds:3989/17-102:1:-Cyanophora paradoxa30.6 1243e-8
Glyma.13G089600.5.pGlycine max31 1553e-8
Glyma.13G089600.4.pGlycine max31 1553e-8
Glyma.13G089600.1.pGlycine max31 1553e-8
Glyma.13G089600.3.pGlycine max31 1553e-8
Glyma.13G089600.2.pGlycine max31 1553e-8
Lus10020932Linum usitatissimum26.9 1713e-8
Seita.9G510400.1.pSetaria italica35.6 1183e-8
Pavir.J31470.2.pPanicum virgatum30.5 1904e-8
Dusal.0788s00005.1.pDunaliella salina35 1174e-8
PGSC0003DMT400080800Solanum tuberosum27.1 2074e-8
AHYPO_005495-RAAmaranthus hypochondriacus29.1 1655e-8
Pavir.J31470.1.pPanicum virgatum30.5 1905e-8
Pavir.J31470.3.pPanicum virgatum30.5 1905e-8
MDP0000943147Malus domestica29.9 1845e-8
Vocar.0004s0238.1.pVolvox carteri30.5 1516e-8
Lus10033444Linum usitatissimum27.6 1856e-8
Mapoly0181s0005.1.pMarchantia polymorpha33.3 1087e-8
Sevir.9G514700.1.pSetaria viridis34.8 1188e-8
Potri.005G164000.1Populus trichocarpa28.3 1669e-8
GSMUA_Achr10P25680_001Musa acuminata34.6 1279e-8
Sobic.001G475400.1.pSorghum bicolor34.2 1201e-7
Phvul.002G310000.2Phaseolus vulgaris27.7 2021e-7
PGSC0003DMT400080798Solanum tuberosum28 2071e-7
GRMZM2G464393_P01Zea mays28.8 2191e-7
evm_27.model.AmTr_v1.0_scaffold00072.5Amborella trichopoda33.6 1311e-7
LPERR03G05890.1Leersia perrieri32.5 1171e-7
196829Micromonas pusilla 31.3 1662e-7
Pavir.Ib00569.1.pPanicum virgatum30.4 1912e-7
Pavir.Ib00569.2.pPanicum virgatum30.4 1912e-7
29908.m006043Ricinus communis36.4 1102e-7
GRMZM2G080530_P01Zea mays37.1 1052e-7
GRMZM2G080530_P02Zea mays37.1 1052e-7
Sobic.K006100.3.pSorghum bicolor37.1 1052e-7
Sobic.001G261476.2.pSorghum bicolor37.1 1052e-7
Sobic.001G261476.1.pSorghum bicolor37.1 1052e-7
Phvul.002G310000.1Phaseolus vulgaris27.7 2022e-7
OMERI03G06470.1Oryza meridionalis34.2 1172e-7
MDP0000279371Malus domestica27.1 2472e-7
Thhalv10018319mEutrema salsugineum28.9 1523e-7
VIT_18s0001g05780.t01Vitis vinifera28.3 1663e-7
Medtr3g074720.1Medicago truncatula37.8 1113e-7
GRMZM2G061314_P02Zea mays32.5 1173e-7
GRMZM2G061314_P03Zea mays32.5 1173e-7
Aqcoe5G364000.3.pAquilegia caerulea29.9 1643e-7
Aqcoe5G364000.1.pAquilegia caerulea29.9 1643e-7
OPUNC03G06310.1Oryza punctata33.3 1173e-7
Pavir.Ia02754.1.pPanicum virgatum36.2 1054e-7
ORUFI03G06470.1Oryza rufipogon33.3 1174e-7
BGIOSGA011305-PAOryza sativa Indica Group33.3 1174e-7
ORGLA03G0063700.1Oryza glaberrima33.3 1174e-7
OBART03G06540.1Oryza barthii33.3 1174e-7
LOC_Os03g09070.1Oryza sativa33.3 1174e-7
OPUNC10G06970.2Oryza punctata34.9 1095e-7
OPUNC10G06970.1Oryza punctata34.9 1095e-7
ONIVA10G07760.1Oryza nivara34.9 1065e-7
ONIVA10G07760.4Oryza nivara34.9 1065e-7
ONIVA10G07760.6Oryza nivara34.9 1065e-7
ONIVA10G07760.5Oryza nivara34.9 1065e-7
ONIVA10G07760.3Oryza nivara34.9 1065e-7
ONIVA10G07760.2Oryza nivara34.9 1065e-7
LOC_Os10g22980.2Oryza sativa34.9 1065e-7
LOC_Os10g22980.1Oryza sativa34.9 1065e-7
LOC_Os10g22980.4Oryza sativa34.9 1065e-7
LOC_Os10g22980.3Oryza sativa34.9 1065e-7
GSMUA_Achr6P10350_001Musa acuminata28.6 1995e-7
Glyma.06G300800.1.pGlycine max32.8 1285e-7
Glyma.06G300800.3.pGlycine max32.8 1285e-7
Glyma.06G300800.2.pGlycine max32.8 1285e-7
ORUFI10G08520.5Oryza rufipogon34.9 1065e-7
ORUFI10G08520.4Oryza rufipogon34.9 1065e-7
ORUFI10G08520.3Oryza rufipogon34.9 1065e-7
ORUFI10G08520.2Oryza rufipogon34.9 1065e-7
ORUFI10G08520.1Oryza rufipogon34.9 1065e-7
Pp3c1_22066V3.1.pPhyscomitrella patens27.8 1516e-7
ORGLA10G0067100.1Oryza glaberrima35.8 1096e-7
MLOC_13222.6Hordeum vulgare36.1 1086e-7
MLOC_13222.3Hordeum vulgare36.1 1086e-7
MLOC_13222.4Hordeum vulgare36.1 1086e-7
OGLUM10G07800.3Oryza glumaepatula35.8 1096e-7
OGLUM10G07800.2Oryza glumaepatula35.8 1096e-7
OGLUM10G07800.1Oryza glumaepatula35.8 1096e-7
Sevir.9G268900.1.pSetaria viridis35.2 1056e-7
Gorai.009G236200.2Gossypium raimondii30.6 1737e-7
Brast03G118400.1.pBrachypodium stacei34.3 1057e-7
KN538733.1_FGP010Oryza longistaminata33.3 1177e-7
OB03G16700.1Oryza brachyantha33.3 1177e-7
Gorai.009G236200.3Gossypium raimondii36.4 1108e-7
Gorai.009G236200.1Gossypium raimondii36.4 1108e-7
Gorai.009G236200.7Gossypium raimondii36.4 1108e-7
LPERR10G05580.2Leersia perrieri33.3 1058e-7
LPERR10G05580.1Leersia perrieri33.3 1058e-7
Brast03G118400.2.pBrachypodium stacei34.3 1058e-7
Pavir.Ib04235.4.pPanicum virgatum36.2 1059e-7
Pavir.Ib04235.5.pPanicum virgatum36.2 1059e-7
Pavir.Ib04235.3.pPanicum virgatum36.2 1059e-7
Pavir.Ib04235.2.pPanicum virgatum36.2 1059e-7
Pavir.Ib04235.1.pPanicum virgatum36.2 1059e-7

Protein sequence