maker_scaffold6479_augustus_gene_0_35_mRNA_2 (PRGDB2174870)

Gene information

PRGdb IDGene nameClassGene typeDomain typesSpecies
PRGDB2174870maker_scaffold6479_augustus_gene_0_35_mRNA_2CLputativeCC, LRRSolanum commersonii

Protein domain view

Blast search results

Gene name hitSpecies hitIdentity (%)Length (bp)E-value
maker_scaffold6479_augustus_gene_0_35_mRNA_1Solanum commersonii99.9 8580
PGSC0003DMT400014490Solanum tuberosum98.6 8580
PGSC0003DMT400014489Solanum tuberosum98.6 8580
PGSC0003DMT400014487Solanum tuberosum98.6 8580
PGSC0003DMT400014488Solanum tuberosum98.6 8580
mrna09363.1-v1.0-hybridFragaria vesca52.5 8990
Glyma.08G055400.2.pGlycine max54.4 8720
Phvul.002G331100.1Phaseolus vulgaris53.1 8760
Migut.D01318.1.pErythranthe guttata58.9 7850
Medtr8g107440.2Medicago truncatula53.6 8490
MDP0000136639Malus domestica51.6 8870
SapurV1A.0082s0160.5.pSalix purpurea52 8870
Potri.015G036300.2Populus trichocarpa51.5 8830
SapurV1A.0082s0160.2.pSalix purpurea52 8870
Potri.012G045300.3Populus trichocarpa51.6 8830
Potri.012G045300.2Populus trichocarpa51.6 8830
SapurV1A.0082s0160.4.pSalix purpurea52 8870
SapurV1A.0082s0160.3.pSalix purpurea52 8870
Potri.015G036300.5Populus trichocarpa51.5 8830
SapurV1A.0082s0160.1.pSalix purpurea51.6 8900
Potri.015G036300.1Populus trichocarpa51.5 8830
Potri.015G036300.4Populus trichocarpa51.5 8830
Potri.015G036300.3Populus trichocarpa51.5 8830
Potri.012G045300.1Populus trichocarpa51.6 8830
AHYPO_012439-RAAmaranthus hypochondriacus49.9 8850
Potri.012G045300.4Populus trichocarpa51.7 8380
SapurV1A.0983s0030.3.pSalix purpurea50.2 8850
SapurV1A.1765s0020.1.pSalix purpurea50.3 8850
SapurV1A.0983s0030.1.pSalix purpurea50.2 8850
Thhalv10011201mEutrema salsugineum47.3 8950
891676Arabidopsis lyrata45.7 9140
29653.m000297Ricinus communis69.4 4940
Manes.06G004700.5.pManihot esculenta57.9 6240
Carubv10008157mCapsella rubella46.5 9010
Cagra.1131s0007.1.pConradina grandiflora46.5 9010
Manes.06G004700.2.pManihot esculenta57.9 6240
AT1G48540.1Arabidopsis thaliana45.7 8870
AT1G48540.2Arabidopsis thaliana45.7 8870
Manes.06G004700.1.pManihot esculenta57.9 6240
Bostr.25219s0546.2.pBabiana stricta55.9 6320
Aco013434.1Ananas comosus56.1 6500
Bostr.25219s0546.1.pBabiana stricta55.9 6320
Araha.0881s0004.1.pArabidopsis halleri55.7 6270
Spipo15G0033600Spirodela polyrhiza56.7 6350
GSMUA_Achr10P26010_001Musa acuminata63.1 5070
898146Arabidopsis lyrata65.1 4780
Araha.1272s0013.1.pArabidopsis halleri64.6 4780
Zosma32g00810.1Zostera marina52.7 6300
Lus10017994Linum usitatissimum52.1 5391e-171
SapurV1A.1765s0020.2.pSalix purpurea43.9 7261e-156
SapurV1A.0983s0030.2.pSalix purpurea43.8 7265e-156
VIT_17s0000g02170.t01Vitis vinifera83.6 2323e-132
Manes.06G004700.4.pManihot esculenta48.6 4422e-119
Manes.06G004700.3.pManihot esculenta48.6 4425e-118
TRIUR3_19918-P1Triticum urartu45.9 4732e-110
Traes_4AS_B5BB2D3A9.12Triticum aestivum67.9 1931e-85
Glyma.01G117600.1.pGlycine max68.2 1261e-51
Cre14.g618750.t1.1Chlamydomonas reinhardtii34 1501e-12
mrna28663.1-v1.0-hybridFragaria vesca28.5 2841e-10
Cre02.g092850.t1.2Chlamydomonas reinhardtii33.1 1421e-10
Glyma.06G102700.1.pGlycine max33.1 1543e-10
Potri.002G097800.1Populus trichocarpa29.9 1674e-10
Pp3c7_11340V3.6.pPhyscomitrella patens31.6 1526e-10
Prupe.1G518600.3.pPrunus persica27.4 2886e-10
Prupe.1G518600.1.pPrunus persica27.4 2886e-10
Prupe.1G518600.2.pPrunus persica27.4 2666e-10
Pp3c7_11340V3.5.pPhyscomitrella patens31.6 1527e-10
Phvul.009G031700.2Phaseolus vulgaris33.1 1547e-10
Phvul.009G031700.1Phaseolus vulgaris33.1 1547e-10
Pp3c7_11340V3.2.pPhyscomitrella patens31.6 1528e-10
Pp3c7_11340V3.4.pPhyscomitrella patens31.6 1528e-10
Pp3c7_11340V3.1.pPhyscomitrella patens31.6 1528e-10
Pp3c7_11340V3.3.pPhyscomitrella patens31.6 1529e-10
Pp3c7_11340V3.14.pPhyscomitrella patens31.6 1521e-9
Pp3c7_11340V3.13.pPhyscomitrella patens31.6 1521e-9
Pp3c7_11340V3.8.pPhyscomitrella patens31.6 1521e-9
Pp3c7_11340V3.12.pPhyscomitrella patens31.6 1521e-9
Glyma.04G101000.3.pGlycine max31.8 1541e-9
Glyma.04G101000.2.pGlycine max31.8 1541e-9
Pp3c7_11340V3.10.pPhyscomitrella patens31.6 1521e-9
Pp3c7_11340V3.7.pPhyscomitrella patens31.6 1521e-9
Glyma.04G101000.1.pGlycine max31.8 1541e-9
Pp3c7_11340V3.9.pPhyscomitrella patens31.6 1521e-9
DCAR_019222Daucus carota31.2 1541e-9
ConsensusfromContig12138-snap_masked-ConsensusfromContig12138-abinit-gene-0.1-mRNA-1:cds:3989/17-102:1:-Cyanophora paradoxa30.6 1242e-9
Phvul.008G173900.2Phaseolus vulgaris32.9 1552e-9
Phvul.008G173900.1Phaseolus vulgaris32.9 1552e-9
Thecc1EG034886t1Theobroma cacao30.7 1662e-9
Thecc1EG034886t2Theobroma cacao30.7 1662e-9
Eucgr.B00027.1.pEucalyptus grandis28.4 2292e-9
Medtr5g064040.1Medicago truncatula32.9 1552e-9
Ciclev10000471mCitrus clementina31.3 1663e-9
Manes.18G066400.1.pManihot esculenta31.3 1663e-9
Cucsa.311500.4Cucumis sativus32.5 1543e-9
orange1.1g006421mCitrus sinensis29.5 1663e-9
orange1.1g006432mCitrus sinensis29.5 1663e-9
orange1.1g006427mCitrus sinensis29.5 1663e-9
Dusal.0106s00019.1.pDunaliella salina27.5 1714e-9
CDF36031Chondrus crispus26.1 2304e-9
Kalax.0290s0017.2.pKalanchoe marnieriana30.1 1665e-9
Kalax.0290s0017.1.pKalanchoe marnieriana30.1 1665e-9
Glyma.14G174400.1.pGlycine max31 1557e-9
Glyma.14G174400.2.pGlycine max31 1557e-9
Glyma.14G174400.3.pGlycine max31 1557e-9
GSMUA_AchrUn_randomP21030_001Musa acuminata34.4 1548e-9
Kalax.0239s0056.2.pKalanchoe marnieriana30.7 1669e-9
Kalax.0239s0056.1.pKalanchoe marnieriana30.7 1669e-9
Seita.9G510400.1.pSetaria italica35.6 1181e-8
SapurV1A.0239s0130.2.pSalix purpurea28.1 1921e-8
SapurV1A.0239s0130.3.pSalix purpurea28.1 1921e-8
SapurV1A.0239s0130.1.pSalix purpurea28.1 1921e-8
Lus10020932Linum usitatissimum28.1 1711e-8
Glyma.13G089600.5.pGlycine max31 1551e-8
Glyma.13G089600.4.pGlycine max31 1551e-8
Glyma.13G089600.1.pGlycine max31 1551e-8
Glyma.13G089600.3.pGlycine max31 1551e-8
Glyma.13G089600.2.pGlycine max31 1551e-8
Cre05.g234655.t1.1Chlamydomonas reinhardtii30.8 1982e-8
AHYPO_005495-RAAmaranthus hypochondriacus29.1 1652e-8
MDP0000943147Malus domestica31 1842e-8
PGSC0003DMT400080800Solanum tuberosum28 2072e-8
Pavir.J31470.2.pPanicum virgatum30.5 1902e-8
Pavir.J31470.1.pPanicum virgatum30.5 1903e-8
Pavir.J31470.3.pPanicum virgatum30.5 1903e-8
Sevir.9G514700.1.pSetaria viridis34.8 1183e-8
Mapoly0181s0005.1.pMarchantia polymorpha33.3 1083e-8
Lus10033444Linum usitatissimum28.6 1853e-8
Dusal.0788s00005.1.pDunaliella salina35 1173e-8
Potri.005G164000.1Populus trichocarpa29.5 1663e-8
Sobic.001G475400.1.pSorghum bicolor34.2 1204e-8
GSMUA_Achr10P25680_001Musa acuminata34.6 1275e-8
Vocar.0004s0238.1.pVolvox carteri30.5 1515e-8
MDP0000279371Malus domestica27.9 2475e-8
evm_27.model.AmTr_v1.0_scaffold00072.5Amborella trichopoda33.6 1316e-8
VIT_18s0001g05780.t01Vitis vinifera29.5 1667e-8
GRMZM2G080530_P01Zea mays37.1 1058e-8
GRMZM2G080530_P02Zea mays37.1 1058e-8
Sobic.K006100.3.pSorghum bicolor37.1 1058e-8
Sobic.001G261476.2.pSorghum bicolor37.1 1058e-8
Sobic.001G261476.1.pSorghum bicolor37.1 1058e-8
29908.m006043Ricinus communis36.4 1108e-8
LPERR03G05890.1Leersia perrieri32.5 1179e-8
OMERI03G06470.1Oryza meridionalis34.2 1179e-8
Medtr3g074720.1Medicago truncatula37.8 1119e-8
PGSC0003DMT400080798Solanum tuberosum28 2079e-8
Pavir.Ib00569.1.pPanicum virgatum29.3 2081e-7
Pavir.Ib00569.2.pPanicum virgatum29.3 2081e-7
Phvul.002G310000.2Phaseolus vulgaris27.7 2021e-7
Thhalv10018319mEutrema salsugineum28.9 1521e-7
GRMZM2G464393_P01Zea mays28.8 2191e-7
GRMZM2G061314_P02Zea mays32.5 1171e-7
GRMZM2G061314_P03Zea mays32.5 1171e-7
Aqcoe5G364000.3.pAquilegia caerulea29.9 1641e-7
Aqcoe5G364000.1.pAquilegia caerulea29.9 1641e-7
Pavir.Ia02754.1.pPanicum virgatum36.2 1051e-7
OPUNC03G06310.1Oryza punctata33.3 1171e-7
OPUNC10G06970.2Oryza punctata35.8 1092e-7
OPUNC10G06970.1Oryza punctata35.8 1092e-7
ORUFI03G06470.1Oryza rufipogon33.3 1172e-7
BGIOSGA011305-PAOryza sativa Indica Group33.3 1172e-7
ONIVA10G07760.6Oryza nivara34.9 1062e-7
ONIVA10G07760.5Oryza nivara34.9 1062e-7
ONIVA10G07760.3Oryza nivara34.9 1062e-7
ONIVA10G07760.2Oryza nivara34.9 1062e-7
OBART03G06540.1Oryza barthii33.3 1172e-7
ONIVA10G07760.1Oryza nivara34.9 1062e-7
LOC_Os03g09070.1Oryza sativa33.3 1172e-7
LOC_Os10g22980.2Oryza sativa34.9 1062e-7
LOC_Os10g22980.1Oryza sativa34.9 1062e-7
LOC_Os10g22980.4Oryza sativa34.9 1062e-7
LOC_Os10g22980.3Oryza sativa34.9 1062e-7
Glyma.06G300800.1.pGlycine max32.8 1282e-7
Glyma.06G300800.3.pGlycine max32.8 1282e-7
Glyma.06G300800.2.pGlycine max32.8 1282e-7
ORGLA03G0063700.1Oryza glaberrima33.3 1172e-7
MLOC_13222.6Hordeum vulgare36.1 1082e-7
MLOC_13222.3Hordeum vulgare36.1 1082e-7
ORUFI10G08520.5Oryza rufipogon34.9 1062e-7
ORUFI10G08520.4Oryza rufipogon34.9 1062e-7
ORUFI10G08520.3Oryza rufipogon34.9 1062e-7
ORUFI10G08520.2Oryza rufipogon34.9 1062e-7
ORUFI10G08520.1Oryza rufipogon34.9 1062e-7
Sevir.9G268900.1.pSetaria viridis35.2 1052e-7
ONIVA10G07760.4Oryza nivara34.9 1062e-7
Cre08.g372900.t1.1Chlamydomonas reinhardtii31 1453e-7
OGLUM10G07800.3Oryza glumaepatula34.9 1063e-7
OGLUM10G07800.2Oryza glumaepatula34.9 1063e-7
OGLUM10G07800.1Oryza glumaepatula34.9 1063e-7
ORGLA10G0067100.1Oryza glaberrima34.9 1063e-7
MLOC_13222.4Hordeum vulgare35.2 1053e-7
196829Micromonas pusilla 31.3 1663e-7
Brast03G118400.1.pBrachypodium stacei34.3 1053e-7
Gorai.009G236200.3Gossypium raimondii36.4 1103e-7
Gorai.009G236200.1Gossypium raimondii36.4 1103e-7
Gorai.009G236200.7Gossypium raimondii36.4 1103e-7
OB03G16700.1Oryza brachyantha33.3 1173e-7
Phvul.002G310000.1Phaseolus vulgaris27.7 2023e-7
LPERR10G05580.2Leersia perrieri33.3 1053e-7
LPERR10G05580.1Leersia perrieri33.3 1053e-7
Pavir.Ib04235.4.pPanicum virgatum36.2 1054e-7
Pavir.Ib04235.5.pPanicum virgatum36.2 1054e-7
Pavir.Ib04235.3.pPanicum virgatum36.2 1054e-7
Pavir.Ib04235.2.pPanicum virgatum36.2 1054e-7
Pavir.Ib04235.1.pPanicum virgatum36.2 1054e-7
KN538733.1_FGP010Oryza longistaminata33.3 1174e-7
Brast03G118400.2.pBrachypodium stacei34.3 1054e-7
GSMUA_Achr6P10350_001Musa acuminata28.6 1994e-7
Gorai.009G236200.2Gossypium raimondii31.8 1734e-7
VIT_12s0134g00420.t01Vitis vinifera33.6 1075e-7
Pp3c1_22066V3.1.pPhyscomitrella patens27.8 1515e-7
EFJ06475Selaginella moellendorffii29.2 1305e-7
MLOC_56030.5Hordeum vulgare35.2 1057e-7
MLOC_56030.3Hordeum vulgare35.2 1057e-7
MLOC_56030.2Hordeum vulgare35.2 1057e-7
Bradi3g23360.6.pBrachypodium distachyon34.3 1057e-7
Bradi3g23360.5.pBrachypodium distachyon34.3 1057e-7
Bradi3g23360.4.pBrachypodium distachyon34.3 1057e-7
Bradi3g23360.7.pBrachypodium distachyon34.3 1057e-7
Bradi3g23360.3.pBrachypodium distachyon34.3 1057e-7
Bradi3g23360.8.pBrachypodium distachyon34.3 1057e-7
Bradi3g23360.9.pBrachypodium distachyon34.3 1057e-7
MLOC_56030.1Hordeum vulgare35.2 1058e-7
Pp3c25_2420V3.16.pPhyscomitrella patens29.5 1298e-7
Pp3c25_2420V3.15.pPhyscomitrella patens29.5 1298e-7
Pp3c25_2420V3.14.pPhyscomitrella patens29.5 1298e-7
Pp3c25_2420V3.13.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.12.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.11.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.10.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.4.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.9.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.8.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.7.pPhyscomitrella patens29.5 1299e-7
MLOC_56030.6Hordeum vulgare35.2 1059e-7
Pp3c25_2420V3.3.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.2.pPhyscomitrella patens29.5 1299e-7
Pp3c25_2420V3.1.pPhyscomitrella patens29.5 1299e-7
Lus10039729Linum usitatissimum31.5 1089e-7

Protein sequence